Entry |
|
Name |
(RefSeq) nucleolar protein 6-like
|
KO |
K14544 | U3 small nucleolar RNA-associated protein 22 |
|
Organism |
rphi Ruditapes philippinarum (Manila clam)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:rphi00001]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
132756427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:rphi03009]
132756427
Ribosome biogenesis [BR:rphi03009]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
132756427
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
1191 aa
MKRKLSDTHDKVSDEENDSSVELEEADDVTDDGSGSSVGESINEEDNDDLGDDKESINDV
QSLVQSCPKSKKTSSRNESLEMGEPASKAAKLSKKDLYKPPTNEELNQLKETENLFHSSL
FRLQITELLTEVTLKAKRRKEIDNTISILKKTITGFKEGEKHDLQDISWLKDSGISVPYE
MKVSQTKGSFQFIPPVNVRITGSFLSETCIKPDIVVDLAVVMPKACFESKDFMNQRYFRK
RALYLSKIALELTKCSFVDEMKFTYLHGNHLKPVLIIAVKVEGQRSIKMHVHAVPESGTF
KLNRFHVEKNNVRSHWFHGMKDTDNQTETDVPTPFYNNSVLEDLLESSMSDTVEKLLTSS
PSVKEGIVLLKVWLRQRELDKGFGSFNGFIITMYVCLLLSQKKLNTLMSSYQIFRNTLLK
LSQTDWTEDGISMCTIKDDPNMPTMQEFHKHFDVVFVDPSGYLNICYAVNRTVFKRVCHE
AKFAMKILEERGIDSFEKLFMKRVMFSSAFDHLFHINLSQDRKEQFDKLGLADRIVDYGR
PKSEACISALSVILEKALGQRVHYLQFALQDRTSWNIKEKHAVKGTDDKLLCGLILNPEF
AFNVLDRGPSADSSEAEEFRKFWGSKSELRRFQDGGICEAVLWLEKSSIAKKQLVCEQIV
KYVLERHACIKADDVHYKAGDLHSVLRVPVAKDDQSVGTGEEEHTAVIHAYDDLCKMLRR
LSDLPLTINSIQGTSPCFRYTEVFPPLPCTFRHREASHLSHGVKRFVPSDKHCPVYVHAL
QVICTLEGSGKWPEEYEAMKRLKVAFHIQLADAIKSEFNVPVKVGLGYVDVLKDNYVFRL
ILAYNREIAMLKSVRSSDGKLLMRDTDEALSLEKQTVELPRLTSTLHGLNQQHSSFSVTC
RLAKRWVSAHMLADYIDEVAIELMVASLYLSPAPYNTPSSGLCGFQRFLELLSTFDWKST
PLLINLNNEFTVGDLAEVPAKFSKDRSTLPLMFISSPLDKFSSHWTKHGPSANILTRLVL
LATKSLEIIRQQISFNDNPDLKQVFRPSLSIFDAVIHLHMQQLPRKSEGLDIDKTVKFGK
NVEVERFPVVEFDPPRLLLNELKATFGELCLFFHDKHGGTVIGVLWKPSQLQAREFKVSH
INYSKLNTDKTESSGNLMLIPNLDAVVEDFRIIGKGIISKIEVKEQETFKC |
NT seq |
3576 nt +upstreamnt +downstreamnt
atgaaaagaaagctgtcagacactcatgacaaggtttcagatgaagaaaatgatagcagt
gttgaattggaggaagctgatgatgttactgatgatggttctggttctagtgtgggtgaa
tcaataaatgaagaagataatgatgaccttggtgatgataaggagagcatcaatgatgta
cagtcattagttcaatcttgtccaaaatcaaagaaaaccagttcaagaaatgagtcttta
gaaatgggggaaccagccagtaaagctgcaaaattgtcgaaaaaagatctgtataagccg
cccactaacgaggagctcaatcagttaaaggaaacagaaaatctgtttcattcatctttg
ttcagactacagattacagaactgttaacagaagtgacattgaaagcaaaacggaggaaa
gagattgacaacacaatatctatattgaaaaaaactatcactggatttaaggaaggtgaa
aaacacgatctacaagatatttcatggttgaaagactccggtatatctgtcccatatgaa
atgaaagtatcgcagaccaagggcagttttcagtttattccaccggtcaatgttaggata
actggaagttttctctccgagacttgtataaaacctgatatcgttgttgacctagcagtt
gttatgccaaaggcctgctttgagtcaaaagatttcatgaatcaacgctactttagaaag
cgagctctttatcttagtaaaatagcattggaactaactaaatgctcatttgttgacgag
atgaaatttacatatctccatggcaaccatttgaagccagtattgattattgcagttaaa
gttgaaggacaaagaagcattaaaatgcatgttcatgcagttccagaatcaggcacattt
aagttaaacagatttcatgtagagaaaaacaatgtgcgctcacactggttccatggaatg
aaggatacagacaaccagacagagacagatgtgccaacaccattctataacaacagtgta
ctagaagatctgctagaatcatccatgtcagatactgttgagaagttactaactagttct
ccttcagtgaaggagggaatagtactcctaaaagtttggttgagacagagggaattagac
aagggattcggcagttttaatggattcatcataacaatgtatgtatgtctcctgttgtct
caaaaaaaactcaacacattgatgagcagctaccagatctttagaaacactctcttaaaa
ctctcacaaactgattggacagaggatggaatttccatgtgcacaataaaagatgaccca
aatatgcctactatgcaggagtttcacaaacattttgatgtggtttttgtcgacccatct
ggatatttaaatatctgttatgctgtgaatagaacagtttttaaacgggtttgtcatgaa
gcaaagtttgctatgaaaattttagaggagcgtggcatcgacagttttgagaagctgttc
atgaagagagttatgttttcttcagcatttgatcatctgtttcatataaatttgtcacag
gacagaaaagaacagtttgacaagctaggacttgctgatcgaattgttgattatggacgt
ccaaaaagtgaagcgtgtatttcagctttgtctgtgattttggagaaagccttgggtcag
agagtacattatcttcagtttgctctacaagatagaacttcgtggaatataaaggagaaa
catgcagtaaaggggacagatgacaaattgttgtgtggacttatattgaacccagaattt
gccttcaatgtcttggacaggggaccttctgctgacagctctgaggctgaagaattcaga
aagttttggggaagcaagtctgaactaagaagatttcaagatggaggtatatgtgaagca
gtgttgtggttagaaaaatcatccattgcaaagaagcagctggtctgtgaacagattgtc
aaatatgttctagaaagacatgcatgcataaaagcagatgatgttcattataaagctggt
gacttacatagtgtactgcgtgtaccagtagcgaaggatgaccaatcagttggtaccgga
gaagaagaacacaccgctgtcattcatgcgtatgatgatctgtgtaaaatgttacgacgt
ttgtctgatcttcccttaaccatcaattctattcaaggaacttcaccgtgttttagatac
actgaggtatttccaccattgccgtgtacgtttcgtcatcgagaggcatcacatttatca
catggtgtgaagagatttgtcccttctgataaacactgtcctgtctatgtacatgcttta
caagtgatatgtacgctagagggtagcgggaaatggccagaagaatatgaagcaatgaaa
agacttaaagtggctttccatatacaacttgctgatgcaataaaatccgagttcaatgtg
ccagttaaagtaggactgggatatgttgatgtattgaaggataactatgtctttcgattg
atattggcttacaaccgggagatagccatgctaaagtctgtacgatcatctgatggtaaa
cttttaatgagggacactgatgaggctctatctctggagaagcagacagtagaactgcca
cgtcttaccagtactttacatgggttaaatcagcaacattcatcattcagtgttacatgc
aggctcgcgaagcgttgggtttcggctcatatgttggctgattacattgatgaagtagct
atagaactgatggttgcatctctctatctatctccagcaccttacaatactccaagctct
ggactttgtggttttcaaagatttttagagctcctgtctacatttgattggaaatcaaca
ccattattgatcaacttaaacaatgaatttacagttggagatttggccgaggttcctgcc
aaattctctaaagatcgatcaactttaccactaatgtttatttcgtcaccattggacaag
tttagtagtcactggacaaaacatgggccgtcagcaaacattctgacccggcttgttctt
ctcgctacaaaatctctggaaattattcgtcaacagatttcttttaatgacaacccagat
ttaaaacaagtgttcagaccatcattgagtattttcgatgctgtaatccatctacacatg
caacagttaccacggaaatctgagggccttgatattgacaaaactgttaaatttggcaaa
aatgtagaagttgagagattcccagtggttgagtttgatcctcctagactgctgttgaac
gaattgaaagcaacatttggagaattgtgtttatttttccatgacaaacatggaggaaca
gttataggggtgttgtggaagccatcacaacttcaagcaagagaatttaaggtctcacat
attaactacagtaaactgaacacagacaaaacagagagttcaggaaatctcatgctgata
ccaaatcttgatgctgttgtagaagattttaggataattggcaaaggaattattagcaaa
atcgaagtaaaagagcaagaaacattcaaatgttga |