Ruditapes philippinarum (Manila clam): 132756436
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Entry
132756436 CDS
T09557
Name
(RefSeq) E3 ubiquitin-protein ligase arih1-like
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
132756436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rphi04121
]
132756436
Enzymes [BR:
rphi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
132756436
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
132756436
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA_ARI1
IBR_1
IBR_2
Ariadne
IBR
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
132756436
NCBI-ProteinID:
XP_060603492
LinkDB
All DBs
Position
Unknown
AA seq
517 aa
AA seq
DB search
MDSEDDMIYEDDESHEEEDSNDDDDFVDIAMEPEPSSTSESKDHEDYPFEVLTADRIVHV
MVECIKEVNAVVQIPSTITRILLNHFRWDKEKLMERYYDGDQDSLFSEAHVVSPYRKDAS
RQAKRNTRGSTASTSSEIMCEICCFTKPANEMTGLECGHKFCSLCWMDYLTSKIVDEGMG
QTIACAAFGCDILVDDVTVMLITFGSSRLKVKQVPINYFYLLLFQCNKLLRWCPAPDLWP
NVVKVKIFCLKKFVQWLCDKTFCFACGENWHDPVKCMWLRKWIRKCDDDSETSNWIAANT
KECPKCHVTIEKDGGCNHMICKNQNCRADFCWVCLGPWEPHGSSWYNCNRFDEDEAKKAR
DSQEKSRCHLQRYLFYCNRYMNHMQSLKFENKLYASVRLKMEEMQQHSMSWIEVQFLKVA
VDVLCSCRQTLMYTYVFAFYLSKNNQSIIFEENQKDLEHATEQLSEYLERDITSELLVDI
KQKVQDKYRYCESRRKVLLDHVHEGYEKEQWEYQEVL
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggacagcgaagacgatatgatatatgaagatgatgaatctcatgaagaggaggacagt
aatgatgatgatgactttgtggacatagctatggagcctgaaccatcgtctacaagcgag
tcaaaagaccatgaagactatccgtttgaagttttgacagcagacagaattgttcatgta
atggttgagtgtataaaagaagtaaatgcggtggttcagattccatcaaccataacaaga
attttgttaaaccattttagatgggacaaggaaaagctgatggaaaggtactatgatggt
gatcaggacagcttgttttctgaggcccatgttgtaagtccatacagaaaagatgcctca
agacaggctaagagaaacacccgaggttcaactgcctccacatccagtgagatcatgtgt
gaaatctgctgttttacaaaacctgcaaatgaaatgacagggttagagtgtggtcacaag
ttctgctccctatgctggatggattatctgacctcaaagattgttgatgagggtatggga
cagactatagcatgtgcggcctttggttgtgatattctagttgatgatgtcactgtcatg
ttaattacttttggttccagcaggttaaaagttaagcaagtacctattaattacttttat
ttgcttttatttcagtgtaataaattattacgttggtgcccagcccctgatttgtggccc
aacgttgttaaagtaaaaatattttgtttgaaaaaatttgtacagtggctttgtgacaaa
acattctgttttgcatgtggagaaaattggcatgacccggtgaaatgtatgtggttgaga
aagtggatacgaaaatgtgatgatgacagtgaaacatccaactggatagctgccaacaca
aaggagtgccctaaatgccatgtgaccattgagaaagatggtggatgtaatcacatgatt
tgcaagaatcaaaactgcagggcagacttttgctgggtgtgtttgggaccctgggaacct
catggatcttcctggtacaattgcaacagatttgatgaggatgaggcaaagaaagccaga
gatagtcaagaaaaatctcgttgtcacctacagaggtatctattttattgtaatagatac
atgaatcatatgcagagtctcaaatttgagaacaaattgtatgcatcagttagattgaaa
atggaagaaatgcagcaacatagcatgtcatggattgaagtacagttccttaaggtcgct
gtcgatgtactatgtagctgtcgacagactctcatgtacacatatgtatttgctttctat
ctgtcaaaaaacaaccagtctatcatatttgaggaaaaccagaaagacttggaacatgcc
actgaacaattatcagagtacttggagcgtgacataacctctgaacttcttgttgatatt
aaacagaaagtacaggacaaatacagatactgtgaaagcagaagaaaggttctgttagat
catgtacatgagggatacgagaaggaacaatgggaataccaagaagtattgtga
DBGET
integrated database retrieval system
