KEGG   Ruditapes philippinarum (Manila clam): 132756472
Entry
132756472         CDS       T09557                                 
Name
(RefSeq) tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
rphi  Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rphi03016]
    132756472
Enzymes [BR:rphi01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     132756472
Transfer RNA biogenesis [BR:rphi03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    132756472
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH_4 zf-CCCH Herpes_UL92 zf_CCCH_4
Other DBs
NCBI-GeneID: 132756472
NCBI-ProteinID: XP_060603535
LinkDB
Position
Unknown
AA seq 634 aa
MADFHKPGVARLKPEFVLADYRPKIDTEYLSQETKDEMAELDKDKEAGDEPQAKRIKLKG
RNKKRPIVGKKRLPADKLCPAIVQERDCQFGEKCKFNHDLKKYLDEKPPDLGEECYLFET
YGKCPCGVTCRYAKPHLDKDFKNITKPGLETMEKKTDTVSNVLTKDLQHLLWKRKYDFSK
TDAVLEKLCPSANHQKKLAESYLKKQETKKAESEIAAERSENTEPENKNAASSQVENGSN
DSNIQVINSKLDIPPAPIKKVPILLFIYSYNETSATPDSTAGQNAPVLLFFLVIQFQVGN
LPFRRICKQYGADITCGEMAMCTNLLQGQQSEWALLKRHKSEDLFGVQLCGGYPDSMTRC
AQLICENIDVDFIDINCGCPIDLIFNKGEGSALMGRQSKFEQIVTSMKSVMNVPLTVKMR
TGIHDNKNIAHTLVPHLKDWGVAMTTLHGRSRTQRYTKTADWEYINNCAEIADPMPLFGN
GDILTYEDYNMHRKNSAISGVMLARGALIKPWLFTEIKEQRHWDISSTERFDMLKDYVHF
GMDNWGSDQQGLEITRRFLLEWLSFLYRYIPVGILEHVPQLINERPPFYRGRDEMETLMA
SPNCGDWVKISEMLLGKVPDGFTFLPKHKANAYK
NT seq 1905 nt   +upstreamnt  +downstreamnt
atggctgattttcacaagcctggtgtagcgaggctaaagccagagtttgttctggcagat
tacaggccgaagattgacacagaatatctgtcccaggaaaccaaagatgagatggcagag
ttggacaaagataaggaagctggagatgaaccacaagcaaaacgcataaaattaaagggt
agaaacaaaaagagaccaatcgttggcaagaagagattgccggcagacaagctatgccct
gctattgtccaagaaagagattgtcagtttggtgagaagtgcaaatttaaccatgatctt
aaaaaatatctagatgaaaaaccacctgatttgggagaagaatgctatctgtttgaaaca
tatggtaaatgcccctgtggtgttacatgcagatatgcaaaaccacatcttgataaggat
tttaagaatatcactaaaccaggactggaaactatggagaaaaagacggacactgtatct
aacgtactgaccaaggatctacagcatttactttggaagaggaaatatgacttctcaaaa
acagatgcagtcctagagaagttatgtccctcagcaaatcatcaaaagaaacttgcagaa
tcctacttgaaaaaacaggaaaccaagaaggcagagtctgaaattgcagcagaaaggtcc
gagaatactgaacctgaaaacaaaaatgctgcctcaagtcaggtggaaaatggaagtaat
gacagtaatatacaagttattaacagtaagcttgatattcctccagctccaattaaaaag
gtacctatacttttgtttatatacagttataacgagaccagtgcgactcctgattcaact
gccggtcagaatgcgccagtcttgctatttttccttgtaattcaatttcaggtaggtaat
ctccctttccgtcgtatatgtaaacagtatggtgcagacattacatgtggagaaatggcg
atgtgtacaaacttgcttcaaggtcagcagtctgaatgggcacttcttaaacgtcacaag
tcagaggatttgtttggagtacagctatgtggtggttatccagactctatgactaggtgt
gctcagctgatctgtgaaaatattgatgtagacttcattgatattaactgtggatgccct
atagatcttatctttaataagggtgagggaagtgcattgatgggaagacagagtaagttt
gagcagatagttactagtatgaaatctgtgatgaatgttccactcacagtgaagatgaga
actggtatccatgacaacaagaatattgctcacactttagtgccacacctcaaagattgg
ggtgttgctatgacaacattacatggacgatcacgtacacagaggtatacaaagacagct
gactgggaatatataaacaactgtgctgaaatagcagatcctatgcctttatttgggaat
ggtgatattttgacatatgaggattataatatgcataggaagaactcagcaattagtgga
gtaatgcttgctagaggtgctctgataaaaccatggctatttactgagatcaaggaacag
agacattgggatatatcatctacagaaagattcgatatgcttaaagattatgttcacttt
ggtatggataattggggctcagatcaacaaggtcttgaaataactagaagatttttgttg
gaatggctttcatttttgtacaggtatataccagtaggtattttagagcatgtacctcaa
ttgatcaatgaaagaccacctttctatcgtgggcgagatgaaatggagacattaatggcc
agtccaaattgtggtgattgggtcaaaatcagtgagatgctgctaggaaaagtacccgat
ggtttcacctttctaccgaaacacaaggcaaatgcatataaatag

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