KEGG   Ruditapes philippinarum (Manila clam): 132756662
Entry
132756662         CDS       T09557                                 
Name
(RefSeq) negative elongation factor D-like
  KO
K15181  negative elongation factor C/D
Organism
rphi  Ruditapes philippinarum (Manila clam)
Pathway
rphi03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    132756662
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rphi03021]
    132756662
Transcription machinery [BR:rphi03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     132756662
SSDB
Motif
Pfam: TH1 DUF2206
Other DBs
NCBI-GeneID: 132756662
NCBI-ProteinID: XP_060603778
LinkDB
Position
Unknown
AA seq 553 aa
MGDDAVQMECLETFATKDFIMEPGVFSMLKQFLQAGGSPERVVELLSDNYHGVAQTVNLL
AEWMIQVGVDINEVQEMVESHLKEVIVRTFDPKKADSIFSDEGETPSWLAEMIEFPTWRQ
LFYRLAEEYPDCLMLNFTIKLISDAGFQGEITSVSTACHQIEVFSRVLRTSISSFLEGGV
EIMEKNLPEFTKMVCHGEHTYLYSQVMMTILAQEQKGGSNIRRICQELQKCANNRGLDVT
PITLALSGAAAYPRACQALSSMLSKKALNPADITILYKMYSDNQYPPPPVDLIRVPAFLD
LLIESLFKMNQRLNQEHKNKYIYLLSYAASVTEAYKKGVRKHIERKELKPTTQALEKVQA
LCALNKNASELLVDVSTLFQCIKFPVIAIGVLAWVDEILSDKSYFKLNTDHTPLHLVLVD
EIVTNHILLHQKALDLLIRLFESNFDELDVLVQLELKKTVLDRMVHVFSHGCVIPVVNYI
RGCHNKQDTDISLIRHFVSEVLDVIAPPYTQDFVNLFLPLIENEGITGTLRSEDGNDPVS
EFICHCKANYSTT
NT seq 1662 nt   +upstreamnt  +downstreamnt
atgggagatgatgctgtacagatggaatgtctggaaacatttgctacaaaagattttata
atggaacctggtgtgttttcaatgctcaaacagtttctacaagcaggtggatcacctgag
cgtgttgtagagttgctgtcagacaattatcatggtgtagcacagacggttaatttatta
gctgaatggatgatacaggttggtgtggacataaatgaggtacaggagatggtagaaagt
catcttaaagaagttattgtgcggacgtttgatcctaagaaagcagattctattttctct
gatgagggagagactccaagttggttagcagagatgatagagtttcctacatggcgacag
ttgttctacaggttagccgaggagtatccagactgccttatgttaaactttaccattaag
cttatatcagatgctgggttccagggagagataacatcagtttccacagcctgccaccag
attgaggtcttctcaagagttcttcgtacctcaatatcttctttcctagaaggtggtgtc
gaaataatggagaaaaatttacctgaatttactaaaatggtatgtcacggtgaacataca
tacctatatagtcaggtgatgatgacaatattagcacaggaacaaaagggaggatcaaat
atcaggaggatttgtcaggagctacagaaatgtgccaataatagaggattggatgtgaca
cctatcacacttgcattgagtggcgcagcagcataccccagagcatgtcaggcactttcc
tcaatgttgtcaaagaaggccctgaatcctgcagatataactatattatataagatgtac
tctgacaaccagtatcctccacctccagttgatcttatccgagtcccagcttttctagat
ctgttgatagaatctctgttcaagatgaatcaaagattgaatcaggaacataagaacaag
tatatatacttactgtcctatgctgctagtgttacagaagcttataaaaagggtgtgagg
aagcatattgaaaggaaggagttgaaacctacaacacaggcattagagaaagtacaagct
ttgtgtgcattaaataaaaatgcttcagaacttttagtagatgtatcaactctcttccaa
tgtataaagtttccagtgattgcaataggagtgttagcatgggtagatgagattttatca
gacaagagttatttcaaactaaatactgatcatacccccctacaccttgtgctggtagat
gaaatcgtcaccaatcatatattgttacatcaaaaagctttagatcttctcatcagattg
tttgaatcaaactttgatgagcttgatgtacttgtacaacttgagttgaagaaaacagta
ttggatcgtatggtgcatgtatttagtcatggctgtgttataccagtagttaactatata
agaggatgtcataacaaacaagacacagacatatctctcatcagacattttgtctctgag
gtattagatgtgatagctccaccatatacacaagattttgtgaatctatttttaccactg
atagagaatgaaggtattacaggaaccctacgctcagaggatggtaatgatcctgtctcc
gaatttatatgtcattgtaaggctaactacagtaccacctga

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