Ruditapes philippinarum (Manila clam): 132756938
Help
Entry
132756938 CDS
T09557
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rphi03037
]
132756938
Cilium and associated proteins [BR:
rphi03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
132756938
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_6
TPR_19
TPR_8
TPR_16
TPR_14
TPR_7
ANAPC3
TPR_11
ARM_TT21_5th
TPR_17
TPR_9
TPR_10
TPR_CcmH_CycH
ARM_TT21_N
TPR_21
HAT_PRP39_C
ARM_TT21_4th
ARM_TT21_2nd
ARM_TT21_C
TPR_MalT
TPR_15
Coatomer_E
HEAT_Nup120
Antiholin
RNPP_C
Motif
Other DBs
NCBI-GeneID:
132756938
NCBI-ProteinID:
XP_060604060
LinkDB
All DBs
Position
Unknown
AA seq
850 aa
AA seq
DB search
MAGVNRMSMMEQVHLGGEDEDDVYGGFNDYNATLDTDDLANDPSFQKAVLRTSHGRRPPP
TGFRGGAGAGAPVLGGARMGTAMRGGRAGPSSMGRPITGAAAGQDPQARPMTAVRAAGYT
AVGKRGVAGFDPLNQAAGPAPPLEPKPEDSPEEKIRQLEKKVNELIEESCFGNSRGELNL
ALEKAKEAGRKERVLVRQREQMSMGDQINLDLTYSVLFNLANQYAANEMYNEALNTYQVI
VKNKMFSNAGRLKVNMGNIYFKQKNYPKAIKMYRMSLDQVPNSHKEMRTKIMQNIGIVFV
KMGQYSDAITSFEHIMSEAPSFKTGFNLILCYFALGDREKMKRAFQKLLTVDLKIDDEDK
YLPHGDKDDDKISQEDKQYNLVLEMIKNDSLRQIERERKYEAENCIKTAAKIISPAIEVS
FDAGYDWCVEQVKNSQYIDLAHDLEIDKAIMFLKQKDFNQAIDTLKSFEKKDSKVACTAA
TNLSFLYFLENDLAQADKYAEVAMTADRYNPYALVNKGNVLYSKGDFEKAREFFREALQN
DSSCVEALYNLGLTNKKIGRLEDALDAFYKLHAILRNSPQVIFQIADIHDQLEDSAQATE
WFMQLIGVVPTDCSVLARMGEIYDNDGDKSQAFQYYYDSYRYFPSNIPVIEWLGAYYIDS
KFCEKAIHYFERAGIVQPNQVKWHLMIASCHRRSGNYNQALETYKFIHRKFPDNVECLKF
LVRICSDLGLKEAQEYATKLKKAEKAKELKDQRASSGTRRGSGRRREGSAEADRETSAGT
RGAGKRGAARRRPNLDDADEESFQPRKQEVDSNYVDPLGPQMERPKTAAKRHNLDDEFAD
EELGDDLLPE
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggccggtgttaatcgtatgagcatgatggagcaagtacatttaggaggagaagatgaa
gatgatgtctatggtggatttaatgactacaatgcaacactagacactgatgatttggcc
aatgacccaagttttcagaaagcagtattgagaacaagtcatggtagacgtccaccccct
actggattccgaggaggagctggggcaggggctcctgtacttggtggtgcaaggatggga
actgctatgagagggggtagagctggtccctcctcaatgggacgtccaataactggtgca
gcagctggccaggatccccaggctagaccaatgacagctgtaagggcagcaggttatact
gctgtagggaaaagaggagttgctgggtttgatcctctcaaccaagcagctggtccagcg
ccacccttggagcctaaacctgaagacagtcctgaagaaaagatccgccagttagagaag
aaagtgaatgaacttattgaggagagttgctttggtaacagtcgtggagaactaaatttg
gcattagagaaggcaaaggaagctggtcgtaaggaaagagtgttggtgagacagcgagaa
cagatgtccatgggagatcagattaaccttgatctaacatattcggtactatttaacttg
gccaaccaatatgctgccaatgagatgtataatgaggcactgaatacataccaggtcatt
gtaaagaacaaaatgttcagtaatgcaggtcgactgaaagtgaatatggggaacatttac
ttcaagcagaagaactacccaaaggccattaagatgtacagaatgtcactggatcaagtt
ccaaactctcacaaagaaatgaggactaaaatcatgcagaacattggtattgtgtttgtg
aaaatgggacagtacagtgacgctatcacttcttttgagcacattatgtctgaggcacca
agttttaaaactggtttcaacctgatattgtgttactttgcccttggcgatcgtgaaaag
atgaagagggcattccagaaacttctcacagtagatctgaagattgacgatgaggataaa
tatctgccgcacggggataaagatgatgataaaataagccaggaagataaacagtataat
ttagtactggagatgatcaagaatgattcattacgacagattgaaagagaaaggaaatac
gaggctgagaattgtataaagactgcagcaaagattatctcgccagctatagaggtgagt
ttcgacgcagggtacgactggtgtgtggagcaagtgaagaactcgcagtacattgacctc
gctcacgacctcgagattgacaaagctatcatgttcctcaaacagaaagatttcaaccag
gcaatagatacattgaagtcatttgagaagaaagattcaaaagttgcgtgtactgcagca
acaaatcttagctttctgtacttcctggagaatgaccttgcccaggcagacaagtatgca
gaggttgccatgacggcagacagatacaatccttatgcattggtaaacaaaggcaatgtg
ttgtattctaagggagattttgagaaagctagagagtttttcagagaagcattacagaat
gactcgtcctgtgtggaggccttatataacttgggtttaacaaacaaaaagataggtcgt
ctggaggatgctctcgatgccttttacaaactacacgctattttaagaaattctccacaa
gttatattccaaatagcagacattcatgatcaacttgaagattctgcacaagctacagag
tggttcatgcagttgattggtgtggtacccacagattgttcagttcttgctagaatgggt
gaaatatatgacaatgacggtgataaatctcaggcattccagtactactatgattcctac
agatatttcccatccaatatacctgtgatagaatggctaggcgcttattatatagactcc
aaattctgtgaaaaagctatccattattttgagagagctggtatagtacaaccaaatcaa
gtaaagtggcatttaatgatagccagttgtcatagacgaagtggaaattataaccaagcc
ttggaaacatataaatttatacacagaaaattcccagataacgtagaatgtcttaagttc
cttgtacgtatatgttcggaccttggattgaaagaagctcaagaatatgccacaaaattg
aagaaagccgagaaagctaaagagttgaaggaccagcgtgccagtagtggtactcggcgt
ggatctggacgcagaagagaaggaagtgctgaagccgatcgtgaaacaagtgctggtacg
agaggagcaggtaaacgaggggccgccagaagacgaccaaatctcgacgatgcagatgaa
gagtcattccaaccacgtaaacaggaagttgattcaaattacgttgatcctcttggacct
caaatggaaagaccaaaaacggctgcaaagagacacaacctggatgatgagtttgccgat
gaagaactaggcgatgatcttttaccagaataa
DBGET
integrated database retrieval system
