Ruditapes philippinarum (Manila clam): 132757156
Help
Entry
132757156 CDS
T09557
Name
(RefSeq) testis-expressed protein 10 homolog
KO
K14827
pre-rRNA-processing protein IPI1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
132757156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rphi03009
]
132757156
Ribosome biogenesis [BR:
rphi03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
132757156
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ipi1_N
HEAT_EZ
Mo25
TOR1L1_N
HEAT_2
Cnd1
HEAT_EF3_N
HEAT_DAAF5
RTP1_C1
Motif
Other DBs
NCBI-GeneID:
132757156
NCBI-ProteinID:
XP_060604332
LinkDB
All DBs
Position
Unknown
AA seq
898 aa
AA seq
DB search
MAKSKKKRQQDFQKVKLKVGKKLKKADNVTNASFRTRGIQISQQLKTGDASQPSTKKKHN
ITDLFSQCRHYSTSVRVEAVNGLKELLTTNPHLVQSHLSDILERLAELLTDKDSVVRQGA
IRVFKFFLPLVSEKQISPFFPLLCAHLCCAMTHIYDDIQVDSLVVLDLLLDNYPRLMIYR
SNQVLSNFIEQISRQQGQGQAKRSLSTDPNSATSSVKWRSSVLNRLQKFLSAILKFQELT
LDSTCVSDGHNPSPTCDVNFTLDEVMSIQKFPVYIQEQWVTPGFILRPSMSKDVKLDVLG
VKFPEFAKTLIPLLLECWVESAPSKDKNKFSGVNSVLEENVGMMYNILQVTQLLWQCTLA
LSTEQSDDILSQESYLKEFEQHFMANFPYSVNTRISKKGKKQQAAEQVSAEVLNLSICNI
MTHFISKQSTNQRKSPFWLPMITMYLNDFLKGKYGRTGVGQSARTVVNILNRLVDRGLCD
VPVYGIITEAYNRFEAANISSTEKKVYMQFFAVVMLHEHSHVISPQWRQKFLHSLPELLL
LCTKENSEITSLVINTMKKSACQKCSGLLDEEIFNKVGQQWFDPLGDVITKLSAEDQISL
VGLLYYTQEIDLKLTKILVSFARCSSISNNLVTLMIQVLQNRYLRNEMEPEATSVHISFL
TNLLVGVSRSDMESLAGDIVCPVIGKYNIIKHTVLDGDNIDDFDRHCFIVEVVCSCVQQF
YNTDQVVEVMFEFIEKLLETSSSSVPLQMVFGICKFVKSLSTIPPAVVSPIIDLSISLVG
HMITWEHSTNQNAVKMMLDLVSKLITDIPGGLERLLQTVEDCLNTDIKVDVLCIIMKSVM
LFLTEGRGSCIRSRPECLHMISNINNRVNTYLSQHQALVTPETENLTRKFNYLVSCVK
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagagtaaaaagaaaagacagcaggattttcagaaagtaaagttgaaggttgga
aagaagttgaagaaagctgataatgtaacaaatgccagcttcagaacccgtggtatacag
attagtcagcagttaaaaactggagatgcttcacaacctagcacaaagaaaaaacacaat
ataacagatttgttcagccagtgtcgtcactatagtacatctgttagagttgaagcagtg
aatggtttgaaagaactccttacaacaaacccacatcttgtacaatcacatttgtcagac
atcttagaaagacttgctgaactgttgacagacaaagattctgttgtaagacaaggtgca
atacgtgtcttcaagttcttccttccacttgtctcagagaaacagatatcacctttcttc
cccctcttgtgtgcccatttatgctgtgctatgacacatatctatgatgatattcaagta
gactcattggttgtgcttgatttattattagataattaccccagattgatgatttacaga
tctaaccaagtactgtcaaatttcatcgagcagatttctagacagcaaggtcagggtcag
gcaaagaggtcacttagtacagatccaaatagtgccacatcatctgtaaaatggagaagt
tcagttttaaatagacttcagaaattcctgtctgccattttgaaattccaagaattaaca
ttggatagcacttgtgtttctgatggtcataatccttctccaacatgtgatgttaacttt
acccttgatgaagtcatgtcaatacaaaaatttcctgtatacattcaggaacaatgggta
acaccaggatttattctaagacccagtatgtcaaaggatgtaaagttggatgttttaggt
gtaaagtttccagaatttgctaagaccttgatccccctcttgctggaatgctgggtagag
tctgcaccttctaaagataaaaataaattttcaggtgtgaattcagtgttagaagagaat
gtaggtatgatgtataacattctacaggtaacacaactactgtggcagtgtactttagca
ctctctactgaacagtctgatgatattttaagccaggagtcatatctgaaggaatttgag
caacattttatggcaaacttcccatacagtgtaaatacaagaattagtaagaaaggaaag
aaacagcaagctgctgaacaggtgtctgcagaagtattgaatttgagcatatgtaacatt
atgactcacttcattagtaaacaatcaaccaatcagagaaaatcaccattttggctacca
atgataacaatgtatttgaatgacttcctgaaggggaagtatgggagaactggtgttggt
caaagtgcaagaacagttgtgaacatactgaataggcttgtggacagaggattatgtgat
gttcctgtgtatggaatcatcactgaggcgtataacaggtttgaggcagctaatatatcc
tcaacagaaaagaaagtttacatgcagttctttgctgttgtcatgttacatgaacactca
catgttataagccctcagtggagacagaaatttttgcacagtctaccagagttactgctc
ttgtgtacaaaagaaaacagtgagattacctcccttgtgattaacacaatgaagaagagt
gcctgccagaaatgttctggtctacttgatgaagaaatattcaacaaggttggacagcag
tggtttgaccctcttggagatgttatcacaaagttgtcagctgaggatcagataagcctg
gttggtttgttgtactatacacaagagattgatctcaagctcacaaagatactcgtctct
tttgcaagatgtagcagcatcagtaacaacctagtgacattaatgatacaagttctacaa
aatagatatttaaggaatgagatggaaccagaagcaacaagtgttcatataagcttcctg
accaatcttctagttggtgtgtcaagatcagatatggagagtttagcaggagatattgta
tgccctgttattggaaaatataacattatcaagcatactgtactagatggtgacaatata
gacgattttgacagacattgttttattgtggaggttgtttgtagttgtgttcagcagttt
tataacacagatcaggtggtggaagtgatgtttgaattcattgagaaactgctagagacg
tcctcatctagtgttccactacaaatggtatttggaatttgtaaatttgtcaagtcattg
agcacaataccaccagcagtagtctcccctatcatagacctttccatctcattggtaggt
catatgatcacatgggaacattcgaccaatcagaatgctgtaaagatgatgcttgatcta
gtctctaagttaattacggatattcctggtggattagaaagactactgcaaactgtagaa
gattgtttaaacacagatattaaggtggatgttctctgtataattatgaaatctgtgatg
ttattcctgacagaggggagaggttcttgtataagaagtaggccagagtgtttacacatg
atttcaaatatcaacaatagagtaaacacctacttgtcccaacatcaggcactggtgacg
ccagaaaccgagaacttgacgagaaaattcaactaccttgtttcctgtgtgaaatga
DBGET
integrated database retrieval system
