Ruditapes philippinarum (Manila clam): 132757478
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Entry
132757478 CDS
T09557
Name
(RefSeq) DNA topoisomerase 2-alpha-like isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rphi03032
]
132757478
03036 Chromosome and associated proteins [BR:
rphi03036
]
132757478
Enzymes [BR:
rphi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
132757478
DNA replication proteins [BR:
rphi03032
]
Eukaryotic type
DNA Topoisomerases
132757478
Chromosome and associated proteins [BR:
rphi03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
132757478
Centrosome formation proteins
Centriole proteins
132757478
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
Toprim
HATPase_c
DTHCT
DUF1980_C
Microp_apicomplexa_20
Motif
Other DBs
NCBI-GeneID:
132757478
NCBI-ProteinID:
XP_060604743
LinkDB
All DBs
Position
Unknown
AA seq
1691 aa
AA seq
DB search
MMAQQAVDSMKSAALFDKMNQNGGETLGAPPPKQKKKAAVAKENENMDEFFIPESGAGEG
KASKKRLSIERIYQKKTQLEHILLRPDTYIGSVESVTQPMWVLNEDMDLMIQRDITYVPG
LYKIFDEILVNAADNKQRDPKMNCIKIDIDPAANKIRVWNNGRGIPVVEHKEHNMFVPTM
IFGHLLTSSNYDDSEKKVTGGRNGYGAKLCNIFSKKFVVETSYKEYKKGFRQTWQDNMGK
TKEPSITDAKEEDFTAITFYPDLEKFRMETLDKDTVDLFTRRAYDIAAASRDVKVILNGK
RIPVKNFRDYVSLFIKDKVDEAGAPIKLVHEIVSPRWEVAVTMSDKGFQQASFVNSIATT
KGGRHVDHVADQVVKKLIEVVSKKNKGGIQIKPFQVKNHLWLFVNCLIENPTFDSQTKEN
MTLQAKSFGSKCQLSEKFITQVSKCGIVESIQSWMKFKAQSQLKKVSGNKQNKLKGIPKL
DDANDAGTKHSLDCTLILTEGDSAKTLAVAGLGVVGRDRYGVFPLRGKVLNVREASHKQI
MENAEINNVVKIMGLQFNKKYEEIDQLKTLRYGKIMIMTDQDQDGSHIKGLLINFLQHFW
PNLLKHNVVNQFITPIVKVTKGKEEHAFYSLPEFEEWKSETSNWNAWKIKYYKGLGTSTS
KEAKEYFSDMRKHKIDFKYSGAEDDASINLAFNKKKVDERKEWLSHWMEEKKRRAEMGLP
ALYLYGKNTRSVTFNDFINRELILFSNADLERSIPSMVDGLKPGQRKVLFTCIKRNFTNR
EIKVAQLAGSVAELSAYHHGETSLMSTIIGLAQNFVGSNNLNLLQPIGQFGTRLHGGKDA
SSPRYIFTMLSPLTKLLFHVNDEPLLNFLYDDNLRIEPEWYCPIIPMVLINGAEGIGTGW
STKIPNYDVREIVANIKRMIDGEEPETMLPSYKNFKGSIYQLIDNKYVVNGEVSIIDDQT
VEITELPVRKWTQDYKEDVIESMANSTEKTPQLITDYKEYHTDTTVKFVVKMTSQNLAKA
EEQGLHKVFKLQNTITSNSMVLFDRNGCIKKYNSVEEILREFFEVRSEMYRKRKAYLEGM
LAAESLKFDNIARFIMEKIEGTVTIENKKKKDLVDLLVRRGYDSDPVKAWKDAQNKGKKK
EVVMIDDDLYNEKEEEEESGPDFNYILNMPLWCLTKERKDELCGKRDAKAKELSDLRRKT
PTDLWRDDLEEFLQELDKVEQQERDDDFGVIENKKAGKSKKPKKIVEEVKPSPIGRRIEP
RFDSIKKKAEGTKRSKEKKEAKNGNILDFMKMEDEESNEPLSLADRLKLKGSPVDVIKGG
KETKVAAQKKEPKAPRQKKSSASPKKKGGKKRNPWSDDSADEISDVSDDDMDGSFLGTVI
PRDGPRRAAAKQVKYNFEAEDEIESDGEGSVVDNLAVVEDQPAVVSDVSDGDSDFEAPVE
KSKPANQKKAMVIESDSDDDDNTNTVNSSKEDKDDEWLRITGQLPDKSSQSTNSEPMFDD
SDVEEVAQPKEELFKPVKSLKADKKPAAKKPAAEKKPRAPAKSKTQKKDSKQPGISAAFS
QSSTAAKSKKVVTISDSDDDSTSHKEPKEKKAAPKKKKKNPWSSDESEDEKPKKAAVKKR
TNVDLSDSDGESAPKKSKTTKKKKKYTSDESFSASDQDNDFVSTATTARGGGRARANVKY
NFGEDSEEEDF
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atgatggcacaacaagctgtggattccatgaaatctgctgctctctttgacaaaatgaat
caaaatggaggggaaacacttggtgcaccaccacccaagcaaaagaagaaagcagctgtt
gctaaagaaaatgaaaatatggacgagttttttattcctgaaagtggtgctggtgaagga
aaggcatcaaagaaaagattgtccatagaaagaatatatcagaaaaagacccagctggag
catatcttgttacgtcctgacacctacattggatctgtggagagtgttactcagccaatg
tgggtattgaatgaagatatggaccttatgatacaaagggatataacatatgttccagga
ttatacaaaatatttgatgaaatattagtaaatgctgctgataataagcaacgagatcca
aagatgaactgcattaaaattgatattgacccggcagcaaataagatacgagtatggaat
aatggaaggggtatcccagtggtagaacataaggaacacaatatgtttgtaccaacaatg
atctttggacatcttcttacatctagcaactatgatgactcagagaagaaagtgacaggt
ggcagaaatggctatggagctaagttgtgtaatatatttagcaagaaatttgtagtggag
acttcatacaaagaatacaaaaaaggatttagacagacatggcaagataacatgggaaaa
acaaaggagccaagtataactgatgcaaaagaggaagactttacagctatcacattttat
cctgatcttgaaaagtttcgaatggaaacacttgacaaagatacagtagatcttttcaca
aggagagcctatgatattgctgcagcctcaagagatgtgaaagttattttaaatggcaag
agaataccagttaaaaactttcgagattatgtgagcttgtttataaaggacaaagttgat
gaagctggtgccccaataaaacttgtacatgagatagttagtcctagatgggaagtggcc
gtcacaatgagtgataaaggttttcaacaagctagctttgttaatagcattgctacaaca
aagggaggaagacatgttgatcatgtagctgaccaagttgttaagaagttaattgaggtt
gtgagtaagaaaaacaagggaggaattcagattaaaccattccaggtgaagaatcattta
tggttatttgtcaactgtcttattgagaatccaacatttgactctcagaccaaggagaat
atgacattgcaggcaaaatcatttggctcaaagtgtcaattgtcagagaaatttatcaca
caggttagtaagtgtggtattgttgaaagtatacaaagttggatgaagtttaaggcccaa
tcacagcttaagaaagttagtggtaacaaacagaacaagttgaagggtataccaaaactt
gatgatgctaatgacgctggaacaaaacactcgcttgattgtactctaatcttgacagaa
ggagattcagccaaaacactggctgttgctggactaggtgttgttgggcgtgacaggtat
ggtgtatttccactacgaggaaaagttctcaatgtaagggaagcctctcacaaacaaata
atggaaaatgcagaaatcaacaatgtggtgaaaataatgggtctacagtttaacaagaag
tatgaggagatagatcagttgaagacactaagatatggcaagattatgatcatgacagat
caagatcaggatggctcacatatcaaaggcctactcatcaattttctacaacatttttgg
ccaaatctgctcaaacacaatgttgtaaaccagttcatcacacctattgtcaaggttaca
aagggtaaagaagaacatgctttctacagtttaccagaatttgaagaatggaagtctgaa
acaagtaactggaatgcttggaaaataaagtactacaaaggtttgggaaccagcacctca
aaggaagctaaagagtacttcagtgacatgcgtaagcataagatagactttaaatattcc
ggagcagaagatgatgcatccattaatctcgcatttaacaaaaagaaggttgatgagaga
aaagagtggctctctcattggatggaagaaaagaaacgaagagcagaaatgggtcttcca
gctctgtatttgtatggtaaaaatacaaggagtgttacctttaacgattttataaacaga
gaacttattctgttctcaaatgctgatttggagagatctattccttccatggttgatggt
ttgaagccaggtcagaggaaagtattgtttacctgcataaagagaaactttacaaatcgt
gagataaaggttgctcagcttgctgggtcagtagctgagttatctgcctatcatcatggt
gagacatccttaatgagcacaattattgggttggcacagaactttgtgggcagcaacaac
ttgaatctgcttcaacctattggtcagtttggaacgagattacatggtggtaaggatgcg
tccagtcccagatacatctttactatgctaagccctttaaccaaactactgttccatgta
aatgacgaacctcttctgaacttcctgtatgatgacaatctaaggattgaacctgagtgg
tattgtcccatcattccaatggttcttatcaatggtgctgagggaataggtactggctgg
agtacaaagataccaaattacgatgtccgtgaaatagttgccaacataaaacgtatgata
gatggagaggagcctgagacaatgttaccatcctacaagaatttcaaaggttctatttat
cagttaattgacaacaagtatgtagtgaatggcgaggtgtcaataattgatgatcagact
gttgagataacagaacttccagtaaggaaatggacccaggattacaaggaagatgttata
gagtctatggccaattctacagaaaaaacaccacagcttatcacagattacaaggaatat
cacactgatacaacagtgaagtttgttgtgaaaatgacatcacagaatcttgcaaaggca
gaagaacaaggattgcataaagtgttcaaattacaaaacactataacaagtaattcaatg
gtgctatttgatagaaatggatgtatcaaaaagtacaacagtgtagaggaaattttacgt
gagttttttgaagttcgatcagagatgtatagaaagaggaaagcctatctagagggaatg
ttagctgcagaatcccttaagtttgataacattgctcgctttatcatggagaaaatagag
ggcactgttaccattgaaaacaagaaaaagaaggacttggttgatttgttggttagaagg
ggttatgactctgatcctgttaaagcttggaaagatgcccagaacaaaggaaagaagaag
gaggtagttatgatagatgatgatctatacaacgagaaggaggaggaggaagaatctggt
ccagattttaactatatacttaatatgccactttggtgtctaactaaagaacgtaaagat
gaactatgtggtaaacgagatgccaaggcaaaggaactgtcagatcttcgtagaaagaca
cctacagatctatggagagatgatttagaagagttcttacaagagttagataaagttgag
caacaagagagagatgatgattttggagttattgaaaacaagaaagctggaaagagcaaa
aagcctaaaaagatagtggaagaagtgaaaccatctcctataggacgacgtatagaacca
cgctttgattctataaagaagaaggctgaagggacaaaacgtagtaaagagaaaaaggaa
gctaagaatggcaacatacttgactttatgaaaatggaagatgaggaaagcaatgaacct
ctatctttagctgatagacttaaactcaaaggaagccctgttgatgtcatcaagggaggt
aaagaaactaaagtggcagctcagaaaaaagaaccaaaagctcctagacagaagaaatca
tccgcatcacccaaaaagaaaggtggcaagaagcgtaatccgtggtctgatgattcagct
gatgaaatcagtgatgtatcagatgatgatatggatggaagcttcctcggaactgtcata
cctagagatggaccaagaagggctgcagctaagcaggtgaagtacaattttgaagctgaa
gatgagatagaaagtgatggagaaggaagtgttgtagataatttagctgtagttgaggat
cagccagctgttgtttctgatgtaagtgatggtgactccgactttgaggcgccggttgag
aaatctaagccagcaaaccagaagaaagcaatggttatagaatctgactcagatgatgat
gacaacactaatacggttaattccagcaaggaagataaagatgatgaatggctaagaatt
actggacaacttccagacaaatcttcacaatcaacaaactctgagccaatgtttgatgat
agtgatgtggaagaagtggctcaacctaaagaagaactttttaaacctgtcaaatcactg
aaagctgataaaaaaccagctgccaaaaaaccagctgctgagaaaaagccacgtgctcca
gccaaaagcaaaacacaaaagaaagattcaaaacagcctggtatctcagctgctttttcc
cagagttcaacagcagcaaaatcaaagaaagttgtaactatatcagattctgatgatgat
tctacttcacacaaagagccaaaggaaaagaaagctgcacctaaaaagaaaaagaagaat
ccttggtctagtgatgaaagtgaagatgaaaagccaaaaaaggctgcagtcaagaaacga
acaaatgttgatctctcagatagtgatggagaaagtgctcctaaaaaaagtaaaactact
aaaaagaagaagaaatatactagtgatgagagttttagtgcctcagatcaagacaatgat
tttgtctctacagctactacagcacggggtggtggacgtgctcgtgctaatgttaaatat
aactttggagaggattctgaggaggaggacttttga
DBGET
integrated database retrieval system
