Ruditapes philippinarum (Manila clam): 132757494
Help
Entry
132757494 CDS
T09557
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rphi01009
]
132757494
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132757494
Protein phosphatases and associated proteins [BR:
rphi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132757494
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
132757494
mRNA cycle factors
Stress granule specific factors
132757494
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
Staufen_C
PPO1_KFDV
Motif
Other DBs
NCBI-GeneID:
132757494
NCBI-ProteinID:
XP_060604771
LinkDB
All DBs
Position
Unknown
AA seq
641 aa
AA seq
DB search
MPSVGPVTIAMPAKTVATAAVSANPHHFPSSLSNQNGVSSHVTSSPPQDPPTTSVLTNEQ
GQETNQQLQGSSSLANTKEKTPMCLINELARFNRVTHQYTLVDEQGPAHKKTFFVKLQIG
DKEEYSASGPSIKKAQHAAAGIALEKTEFKHPPPKSRRGEIITEVDDMMSITPTVELNSL
AMKRGEPAIYRNIENRNPQPMYYQHNYDFRGMYNQRYHYMRPPRSFYVSLKVGTREFIGE
GISRQTARHNAAKKALEILRSLKIPENTEQITQETNFSVEPTKDVPDDDDDTKSEISLVH
EIALRHNLPVSFDVIRESGPPHMKNFVTQCLVGSFKTEAEGNSKKLSKKRAADLMLKELR
NLPSLPPNIPRPKTKPPPTKKKNRNLIKQMQKADPTYGVGINPISRLIQIQQAQKKKEPV
YTLLAERGLPRRREFVMQVQVDEQTCTGVGPNKKLAKRHAAEAMLQLLGYNKPSPQPAKP
AIKMQGDTSMGEKKVTFSDINDEQGQQVVNGSRQKVPGLLVLPDNKRNTYSHLKGVKGQY
TGGGMVKATNRAEHRLRDVCGRSNIEIKFDEFAGANNPSEFLSRLIIASNPPHTLHGSGP
TPDAARDAASLTALKILSEMGMGKDEVNVNMAAGDGPQIKG
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgtaggtcctgttactattgcaatgccagcaaaaactgtagcaacagccgca
gtttcagccaatcctcatcacttcccttcttcattgtccaatcaaaatggagtttctagt
catgtgaccagcagtccgccacaagacccacctacaacttcagtattgaccaatgagcaa
ggccaagaaacaaatcagcaactgcaaggatcgtctagtttggcaaacactaaagagaaa
accccaatgtgtctaatcaatgagttagcccgtttcaacagggtgacccatcagtatacg
ttagttgacgaacaaggtccagctcacaagaagacctttttcgtcaagctacagattggt
gataaggaggagtattctgcctcgggtcccagtataaagaaggcccaacatgcagctgcg
gggatagctctagagaaaactgagttcaagcacccacctcctaaatcaaggagaggtgaa
atcataactgaggttgatgatatgatgtctattacaccaacagttgaactcaattctctg
gcgatgaaaagaggagaaccggctatttatagaaacattgaaaacagaaatccacagcca
atgtactaccaacataactatgacttccggggcatgtacaatcagaggtatcattacatg
cgccctcctagatcgttctatgtttccctgaaggttgggactcgtgaattcatcggtgag
ggtatatcaagacagacggctagacacaacgctgcgaaaaaagctctagaaatactacgc
agtttgaaaataccagaaaatacggaacaaattacgcaagaaaccaattttagtgttgaa
cctacaaaagacgttcctgatgacgatgatgataccaagtcagaaattagtttagtccat
gagatagccctccgacacaatctacctgtgtcgtttgatgtgatacgagaatccggtcca
cctcacatgaagaactttgtaacacagtgccttgtaggaagttttaaaacagaagccgag
ggtaatagtaaaaagttgtcaaaaaaacgagctgcagatttaatgctgaaagaattacga
aatctcccatctctgcctccaaatataccgagaccgaagacaaaacctccacctacaaag
aaaaagaatagaaatctaatcaagcagatgcagaaagcagatcctacgtatggagtgggc
atcaaccctatatcccgccttatacagatacaacaagcccagaaaaagaaggagcctgtc
tacacattactggctgagagaggtcttcctaggcgtcgtgaatttgtcatgcaggttcag
gttgatgagcagacttgtaccggtgtaggacccaataaaaaacttgcgaagaggcatgct
gccgaggccatgttacagttgctaggttacaataaaccctcaccacaacctgccaaacca
gctattaaaatgcaaggagataccagtatgggtgaaaagaaagtaacattttctgatatt
aatgatgaacaaggtcagcaggttgtgaatggtagtagacagaaggtgcctggcttgttg
gttcttcctgataataaacgtaatacatacagtcatctgaaaggtgtcaaaggtcagtac
acaggtggaggtatggtgaaagctacaaacagagcagaacatcgtctaagggatgtgtgt
gggagaagtaacatcgagatcaagtttgatgagtttgctggtgctaataatccgagcgag
tttttaagtcgactcatcattgcctccaacccaccacacaccctgcacgggtccggcccc
accccagatgctgcccgagatgctgcttctcttactgctctaaagatcctctcggaaatg
ggcatgggaaaagatgaagttaacgtgaatatggctgctggtgatgggccacagataaag
ggctaa
DBGET
integrated database retrieval system
