Ruditapes philippinarum (Manila clam): 132757688
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Entry
132757688 CDS
T09557
Name
(RefSeq) RNA-binding protein Musashi homolog 2-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132757688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132757688
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
132757688
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
132757688
NCBI-ProteinID:
XP_060605024
LinkDB
All DBs
Position
Unknown
AA seq
440 aa
AA seq
DB search
MKMESNGPASPTNGTEEIPNDPGKMFIGGLSWQTTAEKLKEHFGKYGEIKESMVMKDPTT
KRSRGFGFVTYKDPISVDQCLENGPHILDGKQVDPKVAFPRKAQPKMVTKTKKIFVGGLS
AQTTVEDVKKYFSTFGKIEDAMLMFDKTTNRHRGFGFVTFEDEDTVERVCELHFHEINKK
MVECKKAQPKEVMLPQQLARGRGIARVTEDGEIIWEPLPSDLVMPELCLVPNMLQPYQAA
YGRGLPTAAFAPAGYYYPAGLGSLGQSVGVTPAQNAALAFSTRASTVSRTPGFPSYGLIP
SANERHASPTALYNFADVTTGVPTIQRSEPSPLPNVSTSPLQRANDTQALFTAHSQAQAL
VNAQRSAMAFSSLQQVPQATSPLTSRQIIPGASSPGPLDQLISVQDPLSYLQATSPQPAG
FSGLNLTRPTQLVSFQNGYH
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggagtctaacggacctgcatccccaactaatgggactgaggaaataccaaat
gatcccgggaagatgtttattggtggcctcagctggcagaccactgcagaaaaattaaaa
gagcactttggtaaatacggagaaattaaggaatccatggttatgaaagacccaacaaca
aaacgttcaaggggatttggtttcgtgacatataaagacccaattagtgtagatcagtgc
ttagaaaatggacctcatatactggatggaaaacaagttgacccaaaagtggcgttccct
agaaaagcacagccaaagatggtgaccaagaccaagaaaatatttgtaggaggattgtct
gcgcagaccacagtagaagatgtgaagaaatatttctcaacatttggaaaaatagaagat
gctatgctgatgtttgataaaactacaaacagacatagaggatttggttttgttacgttt
gaagacgaagatactgttgaaagagtgtgtgaactccatttccatgaaatcaacaagaag
atggttgagtgcaagaaagcacagcccaaagaagtgatgttgccgcaacaattggcacgt
ggtcgcggtattgcacgagtgaccgaggatggagagattatctgggaacctttacccagt
gaccttgttatgccagaattgtgtttggttccaaatatgttgcaaccgtatcaagcagcg
tatggtcgtggattgccaactgcagcattcgctccggcaggctattattatccagctggg
ctaggctctcttgggcaaagtgttggcgtcacgccagctcagaatgcggcacttgcattc
agtacacgggcttcaactgtgtcccgaacgcccggcttccctagttacggcttgatcccc
tcggcaaatgagagacacgcttctccgactgctctgtataactttgctgacgtgactact
ggagtccccacaattcagaggagtgagccgtctccactcccaaatgtctccacttcccct
ctacaacgagccaatgacacacaggccctgttcacggcccattcccaggcacaggctcta
gtaaatgcccagcgctcagctatggcattttcgtcccttcaacaagtcccacaggctacc
tctcctcttacaagtcgtcagatcatacccggggccagcagcccagggcctctcgatcaa
ctgatctcagtacaggaccccctcagctacttgcaggcaacaagcccacagccagccggc
ttcagcgggcttaatctgaccaggccaacacagctggtcagcttccagaatggctaccat
taa
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