Ruditapes philippinarum (Manila clam): 132757810
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Entry
132757810 CDS
T09557
Name
(RefSeq) patched domain-containing protein 3-like isoform X1
KO
K24682
patched domain-containing protein
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rphi04990
]
132757810
Domain-containing proteins not elsewhere classified [BR:
rphi04990
]
Other domain-containing proteins
Patched domain-containing proteins
132757810
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sterol-sensing
Patched
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
132757810
NCBI-ProteinID:
XP_060605204
LinkDB
All DBs
Position
Unknown
AA seq
1015 aa
AA seq
DB search
MYFFVRFKMTSNTALLNGGMDVKRMNGGPSHNSTQGNKLHEESDENKGCCGCTCLKKVSN
AIVSGLEKSFYRIGKLVARNPWKTIFTCIVVCCVAGIGLMRWHEETEYVKVWLPRGSRMF
EEDLWVKANFPERIRYEAVIIEDENVLSPQTLNAMFDIFKTAQNFKIEDGSSLEHLCIKA
GPICRVNSILELWGYNETVIRSLTEDVIFKTVNQDVIQSPLYRNEIDLEKILGGIQRDNE
SRIISARATTFFWFIKRNDSSVASAEEWEKQLIELINDVGHKHIDQMYIYTARTFDDAIM
GAASHDVGLLTIGFAFVYLFLTFSIGNYSLLEHKIFLAMSGLLSIGMAIIFTYGVGLGTG
IMFGPIHQITPFMLLGIGVDDMFVIVESLRQLTPKERQLPVQERIGLTLKHAGVSITVTS
VTDIVAFGIGGSTVIPSLSTFCMYAAIGVLALYILQATFFVACVTLDEQRIDSKRNACLL
CYKHDDNYKPSKHYSFSLQYTFMRNIWGPFLTKIPVKIIVILVAVAMTGVNIWSFIRIKH
DFDPSMYLPKDSYSQKYVEADRNYFPNDGAFVQMYCGKLDYRQNFNRLHELYNLIKDKPS
VQSTTVDFWLASFVKWQNETSNSAISHTITNQSQDISVVPYQQDLLHQLMKFLGTEDGRV
YWRYIKFDDLTNPTKIVGSVLTFRHVKCTTSICNIKAMDDMRELVDSFSFPGGGTCFVYS
NPQYMFNETNKVLKLELYRNLALAAICVFVVTLILIANFWTSILVFICVVCTVIDVAGTM
QFWDISVDTASSVLLILCFGLAVDYSAHIGHSFMTHTGSKNERTRKTLVSMGPAVFSGGF
STFLAFLLLVNSISYGFTLFFRIFTSVVIFGLFHGLVFLPVILSLIGPAPYNTNFLSETD
KLEAKYSEAADIALRVHNGDINEVEMKELYPLKKAVNGSIKDNGLFWKEFDSSVPGNNFE
RCNSLPNSQCALEVSGSNDNNPRYSGSYYEQMSNGSLVQIPFPESHIPFTTKDNV
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgtattttttcgtacggtttaaaatgacgtcgaatacagctttattgaatggtggaatg
gatgttaaaagaatgaacggtggacctagtcacaattctacacaaggaaataaattgcac
gaggaaagtgatgaaaataaaggatgttgtgggtgcacgtgcttgaagaaagtcagtaat
gccattgttagtggacttgaaaaatcattttacagaattgggaaattggttgcgaggaat
ccatggaagacaatattcacgtgtatagtggtgtgctgtgttgcagggataggtttaatg
agatggcatgaggagacagaatatgtgaaggtttggttaccacgcggttcaagaatgttt
gaagaagatttgtgggttaaggcgaattttccagaaagaatacggtacgaagcggttata
atagaagatgaaaatgtcctcagccctcaaaccctgaatgctatgtttgatatattcaaa
acagctcaaaattttaaaattgaagacggttcgtctttggaacatctttgtataaaggca
ggtcctatttgcagagttaacagtattttagaattatggggttataacgaaacagtaatc
agaagtcttacagaagatgttatatttaaaacagttaatcaagacgtcatacaaagtccc
ttataccggaacgagatagatctagaaaaaatactcggtggcattcaacgtgacaacgaa
agtagaataatcagtgctcgtgcaacaacgtttttctggttcatcaaacggaacgactct
tcagtggcttcagcggaagaatgggagaaacaacttatagaattaattaacgatgttggt
cataaacatatagatcaaatgtatatatacactgctagaacttttgatgatgctataatg
ggagcggcgtctcatgatgttggactactaactataggatttgcctttgtttatttgttt
ttgacatttagcattggcaattatagcctcctagaacataagatattcctggcaatgtca
ggcttgttaagtattgggatggcaattatattcacatatggtgtaggactgggaactggt
atcatgtttggtcccattcatcaaataacacctttcatgttactgggtatcggtgtggat
gacatgtttgtgatagtggaatcattgcgacagctcacacctaaagaaagacaattacct
gttcaagaaagaattggactaacgttaaaacatgccggtgtttctataactgttacttcc
gttacagacatagtagcttttgggattggtggatcaacggtgattccatcattgagtaca
ttctgtatgtacgcggctataggagttttagcactatacatacttcaagcaacgttcttt
gtggcatgtgtgaccttagatgagcagagaattgactccaagaggaatgcgtgcctgctt
tgttataaacatgacgacaattataaacctagcaaacactatagctttagtctacaatat
acctttatgagaaatatttggggtccatttctgacaaagatcccagtaaagataattgta
atactggtagctgttgctatgacaggtgtcaacatctggagctttatccgaataaagcat
gactttgatcccagcatgtacctgccaaaagattcttattcccagaaatatgtagaggca
gacagaaactactttccaaatgacggtgcttttgtacagatgtattgtggcaaactggat
tacaggcagaatttcaatcggttacacgagttgtataatctgataaaagataagccatca
gtacagtcaacaactgtagatttctggttggcaagttttgtgaagtggcaaaatgagacg
tccaactcggcaatatctcacacaataacaaaccagtctcaagatatttcagttgtgccc
tatcaacaagatttgttacaccagttgatgaaatttcttggaactgaagatggaagagtt
tattggagatatataaagtttgatgatttaactaaccctactaaaattgtgggatcagtg
ttaacatttcgtcatgtgaaatgtacaacatctatttgtaacatcaaagctatggatgac
atgagggaactcgtggacagcttttcttttcctggcggtggtacctgttttgtctactcc
aacccacaatacatgttcaatgaaactaataaggtgctgaaactagagttgtaccggaac
ctcgctcttgcagctatttgtgtttttgttgttacattaattctcatcgccaacttctgg
accagcattctcgtcttcatatgtgtcgtctgcacagttattgatgtggctggaacgatg
cagttttgggatatatctgtggacacagcatcaagtgttctactcattctttgttttggt
cttgcagtcgactattccgcgcatattggccactcctttatgactcataccggcagtaaa
aatgagcgtacaaggaagacattagtgagtatgggaccagctgtattcagtggtggattt
agtacattccttgctttcttacttctagtcaacagtattagctatggattcacacttttc
ttcagaatatttacgtcggttgtgatatttggtttatttcatggacttgttttcctgccg
gtgattttaagtttaattggcccggcaccatataatacaaacttcttgtcagaaacagac
aaactagaagctaaatattcagaggcagctgatatagcgttacgtgttcacaatggtgat
ataaatgaagtcgaaatgaaagaactgtatccattaaagaaagcagtgaatggaagtata
aaagacaacggtttattctggaaagaatttgatagttccgtaccaggtaacaactttgaa
aggtgcaatagtttaccaaacagtcaatgcgcattagaagtttcagggtccaacgataac
aatccaaggtattcggggtcatattatgagcagatgtccaatggatcgctggtacagatt
ccattccctgaatcccatataccgtttacaacgaaagacaatgtttga
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