Entry |
|
Name |
(RefSeq) very low-density lipoprotein receptor-like
|
KO |
K20053 | very low-density lipoprotein receptor |
|
Organism |
rphi Ruditapes philippinarum (Manila clam)
|
Brite |
KEGG Orthology (KO) [BR:rphi00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:rphi04131]
132757826
Membrane trafficking [BR:rphi04131]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
132757826
|
SSDB |
|
Motif |
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Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
852 aa
MKDFIQNYGLFLLLLVFGCIFITRAEDNAETEDGNCRFGHWKCLKTGKCIPLSWKCDSDP
DCGDGDESDEQSCPPKTCAEEEFSCSKNSTGRCIPNRWKCDNDPDCDEGEDEDKLLCEKR
NSTEICPHNEFSCGDGNCVSNEWRCDGVEDCENGADEQNCTKTCDEQMFMCQDGRCISSS
WHCDGDHDCLDMSDEENCGEKVCTSDEFKCDDKSRCIDIKWKCDGDFDCGDHTDETSNCT
HSHTHSEEPEVCNPTSEFKCLTSGECIHKSWQCDGDPDCTDSSDEGKNCNYTCRDDQFMC
ENHVCISNSLKCDGNEDCLEGSDEKECTRTCDEIDEFDCNGDGSFCIPEHKVCDGKNDCQ
RREDEDPFLCHTKEDLPERNPCLNHNCTHDSHCVRKAFHNNTFQAICECDSGYRWVEDEQ
LCKDIDECEEPGLCSQICINTRGGYKCDCNPGYTLQRHYFCRADGEQAWLYYANRRDIRR
LRTDSRYMEIIVEETTNSIALDIDYEDGLMFWTDGGTEKIMRAKVGGDAVLANDIQAVIS
NIKGDPFSTDGIAVDWLNKNFYWTDTGSNTISVATYAGDKSKTLISEDLDDPRAICVDPE
NGYMYWTDWGHEPKIERCGMNGENRKTIVEGGDDLQWPNGLTIDYIGKRIYWIDSKLHKI
GTANMDGSDQRHVLVDSSEIRRPFSISVFEDSLYWTDWHTNSIRSIHKVTGRNPKTLSLG
SYSVMDIKVYHELRQVRDFKEQAKALCRNAQCEYMCLPAAKVTKNATVSCVCADNQNLNN
DKRSCTAAQVTPKPATKVPDTTQKPGETTHKPDVTTKTPSETKKPIQTTKGGYTVVPGTS
TVWYAEEHEGNG |
NT seq |
2559 nt +upstreamnt +downstreamnt
atgaaggattttatacaaaattatggattgtttcttctattattagtgtttggttgcatt
tttattacgagagctgaggataatgcagaaaccgaagatggaaattgtcgatttggacat
tggaagtgcttgaaaactggaaaatgcattccacttagctggaaatgtgattcagaccca
gattgtggcgatggtgacgaatctgatgaacaaagttgtcctcctaagacatgtgctgaa
gaagaatttagttgttctaaaaattccactggcagatgtatccctaaccgatggaaatgt
gataatgaccctgactgtgatgaaggagaagatgaagataagttactctgtgagaaaaga
aatagcacagagatttgtccacataacgagttctcctgtggggatggcaactgtgtaagc
aatgagtggaggtgtgatggtgttgaagattgcgaaaatggagctgatgaacagaactgc
actaaaacttgtgatgaacaaatgtttatgtgtcaagatggccgatgcatttcaagttca
tggcattgtgatggtgatcatgattgtttagacatgtcagatgaggaaaattgtggagag
aaagtatgcacaagtgatgaattcaaatgtgatgataaatcaagatgtattgatatcaaa
tggaaatgtgatggtgactttgattgtggtgatcacacagatgaaactagcaattgtaca
cacagtcacactcactcagaagaaccagaagtctgcaatccaacatcagaattcaagtgt
ctcacatctggggaatgtatacacaagtcatggcagtgtgatggtgatccggactgtact
gatagctctgatgaaggcaaaaattgtaattacacatgcagagatgatcagtttatgtgt
gaaaaccatgtttgcatatcaaatagcttgaaatgtgatgggaatgaggactgcttagaa
ggatctgatgaaaaagaatgtacgagaacatgtgatgaaatagatgaatttgattgtaat
ggagatggctcattctgtattccggagcataaagtttgtgatggtaaaaatgactgtcag
cgtagagaagatgaggacccttttctttgtcataccaaagaggatttacctgaacgaaac
ccatgcctgaatcataattgcactcatgactcgcattgtgttagaaaagcatttcacaat
aacacatttcaagctatatgtgaatgtgatagtggatatagatgggtggaagatgagcag
ttatgtaaagacattgatgaatgtgaagagccgggtctttgttctcagatttgcatcaac
actcgtggtggatataaatgtgattgtaatcctggctacactcttcagaggcactacttc
tgtcgggccgatggtgaacaagcgtggttgtactatgcaaaccgtagggatatccgtaga
ttgagaacagactctagatacatggagataattgtagaagaaacaactaacagcattgct
ttagatattgattatgaagatggcctgatgttctggacagatggtggaactgaaaaaata
atgagagctaaggttggtggtgatgcagtacttgctaatgatatccaggcagtgataagt
aatataaaaggagatcccttttccactgatggtatagctgtagattggcttaacaagaat
ttctactggacagacactggatctaataccatcagcgttgcaacttatgctggtgacaaa
tctaagacattgatttctgaagatcttgatgatccaagagctatatgtgtggatccagaa
aatggatatatgtactggacagattggggacatgaacccaagattgagagatgtggtatg
aatggtgaaaacaggaaaactattgtcgaaggtggtgatgacttacagtggccaaacggt
cttactattgattacatcgggaagcgtatatattggattgattcaaaacttcacaagatt
ggaactgctaacatggatggaagtgaccagcgccatgttctagtggactcttctgagatt
agacgaccattctccatctctgtgtttgaagattctctgtactggacagactggcatact
aactccatccgttctatccacaaggttactggtagaaatcctaagacattatcacttggt
tcatattcagtgatggacatcaaggtgtatcatgagctcagacaagttcgagattttaag
gagcaagcaaaggcattatgtagaaatgctcagtgtgagtacatgtgtttgccagcagct
aaggtcacaaagaatgctactgtgtcatgtgtttgtgctgataaccaaaatcttaataat
gacaagagatcttgtactgctgcacaagttactcccaaaccagcaaccaaagtacctgat
accacacagaaacctggcgaaaccacacacaaacctgatgttacaacaaagacaccaagt
gaaacaaagaaacccattcaaactaccaaagggggttacactgtcgtaccaggaacatca
actgtgtggtatgctgaggagcacgaaggaaacgggtga |