Ruditapes philippinarum (Manila clam): 132758105
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Entry
132758105 CDS
T09557
Name
(RefSeq) structural maintenance of chromosomes protein 1A-like
KO
K06636
structural maintenance of chromosome 1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rphi03036
]
132758105
Chromosome and associated proteins [BR:
rphi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
132758105
Meiosis-specific proteins
Cohesin complex and associated proteins
132758105
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_hinge
SMC_N
AAA_23
AAA_29
AAA_15
AAA_21
ABC_tran
DUF1482
Motif
Other DBs
NCBI-GeneID:
132758105
NCBI-ProteinID:
XP_060605600
LinkDB
All DBs
Position
Unknown
AA seq
1182 aa
AA seq
DB search
MPGYLKYIEVDNFKSYLGKQKIGPFKKFSAIIGPNGSGKSNLMDAISFVLGEKTSNLRVR
RLSDLIHGAPVGKPAANRASVTAVYADQVTEKETVFTRIIHGSSSDHKINGQSVSSSQYN
QELEKIGVLVKSKNFLVFQGTVESLAMKNAKERMAMFEEISRSGELKEDYDKAKAEMLKA
EEDTQFNYHKKKGIAAEKKEAKLEKDEAERYQKLKQELEDKHLDLSLLRLFYNERDIDKV
TEDINHKNHALQKEVKKKDRIEDEIKEKKKEQGKLQRELTKVEATIKESEVELNKKRPLY
IKAKEKTAHMIKKLDSAKKSLKQARKTHDNHEQEINELERELEEVDAKRREFEEQIEEES
QSQGRDLQLEESQVLEYQRLKEEAGKRSAKLLQEMDSIQREQKSDQDRYDNEIRKKNELL
AKIKQKEHEMEENKKRVEKLNDYIRQSTQAIEEQRVAEEELGGEVTTANERIQQIENELC
SIGEQLSEAKVDKHESARAMKKAELLDNLKRLYPGVHGRLIDLCQPSHKRYQIAITKCLG
KYMDAIICDTLKTAKECIQYMKEQRIEPETFLPLDYLDVKPVNEKLREIREPKNVKLVVD
VIRYEPPSIKKALIFACGNALVCETVEDARKVAFGGHERHKSVALDGTLFQKSGVISGGA
SDLKAKARRWDEKMLGQLKQKKEKLTTELKEMSKKKRKESELNTIRSQIKGLETRLKYSI
TDRDNTQNKHLTQNEKDLRNYKEQIHSFEPRMHQLERSMNEREDTIKALKDRMNRVEDEL
FEDFCAQIGVENIRQYEERELLVQQERAKKRLEFENQKFKLQNQIEFERSRDTLANVMKW
EKAVTDDEKELEKVKNDEARNMETIDREMQKADRCKQQRLTIKSQVDDFEGQINEIKKRL
NAQNKEIAAAQKQVAGHETWLEQKRADRHSLLKTCKMDNINLPMRKGTMDDITQENEPSS
AMDGTQMDGTQSETGLDSMSSKGAKKIYEKEALIIIDYSGLDDDLKEIDDPSEVKKNIEQ
MTKGVSDMVSTLQRINAPNMKAMEKLDGVKERLMETSEEFENARKRAKKAKQAFEKVRKE
RYDRFMHCFDHVSNKIDEIYKSLARNQSAQVAAYIREESQKHFQCIVISLKEEFYNRADA
LIGIYPEQGDCVISNVLTLDLTQYEDPHQYEEDDRTALLNVR
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgcctggttatttaaagtatattgaggtggacaacttcaagtcctacctcggtaaacaa
aagattggacctttcaaaaagttttcagcaatcattgggcctaatggatcaggaaagtcc
aaccttatggatgcaattagttttgtacttggtgagaaaacatctaatctacgtgtgaga
aggctaagtgatctgattcatggtgctccagttggtaaaccagcagctaatagggcttca
gtgacagcagtgtatgctgaccaagtaacagagaaggagacagtgttcaccagaatcata
catggatcgtcatctgatcataaaatcaatggacagtcagtatcatcatcacagtacaac
caagagttggagaaaatcggtgttcttgtaaagtccaagaacttccttgtcttccaggga
actgttgaaagtcttgccatgaaaaatgccaaggaaagaatggcaatgtttgaagaaata
agcagatcaggagaactaaaggaggattatgacaaggctaaggctgagatgttgaaggct
gaggaagacacacagttcaactatcataaaaagaaaggtattgctgcagagaaaaaagag
gccaagttagagaaagatgaggcagaaagataccaaaaacttaaacaagaactggaagac
aaacatttggatctgtcactgttacgtttattctacaatgagagagacatagacaaggta
acagaggatattaaccacaagaatcatgccctgcagaaagaggtgaagaaaaaagacagg
attgaagacgagatcaaagaaaaaaagaaagaacaaggcaagcttcagagagaactgaca
aaagtagaggcaaccataaaagagagtgaagttgagctgaacaagaaaagaccactgtat
ataaaagccaaagagaaaacagcccatatgatcaaaaaattagacagtgccaaaaaatca
ctgaaacaggcacgtaaaactcatgataaccatgaacaagagataaatgagttagagaga
gaattagaagaggtagatgcaaagagacgagaatttgaggagcagattgaagaagaatca
caatctcaaggtcgtgaccttcaacttgaggaatctcaggtattagagtaccagcgactg
aaggaagaggcggggaagagatcggctaaattattacaggaaatggactcaattcagaga
gagcagaagtcagaccaggatagatacgataatgaaatacgtaagaagaatgaactgtta
gctaaaatcaaacaaaaagaacacgagatggaagagaataagaaacgtgtggagaagtta
aatgattatatcagacagagtactcaagctatagaagaacaaagagtagctgaagaagaa
ctaggaggggaggttacaactgcaaatgaaagaatacaacaaattgaaaatgaattatgc
tcaattggtgagcaacttagtgaagcaaaggttgataaacatgagtcggctcgagctatg
aagaaagcagaattattggacaacttaaagcgtttatatcctggtgtgcatggacgattg
atagatctgtgtcaaccaagtcacaagcgataccagatagctatcaccaaatgtcttggt
aaatacatggatgccatcatctgtgacacactgaaaacagcaaaggaatgtatccagtat
atgaaggaacagaggattgaacctgaaacctttcttccccttgattatctagatgtgaaa
cctgttaatgaaaaactaagggaaattcgtgaaccaaagaatgtaaaattggtagttgat
gtaatcagatacgagccaccatctattaagaaagctttaatctttgcctgtggaaatgct
ctagtttgcgagacggtagaggatgctagaaaagtggcgttcggaggtcatgagagacat
aagtctgtagcattagatggtacattgttccagaagtctggtgtgatctcaggaggtgct
agtgatttgaaggccaaagctagacgttgggatgaaaaaatgcttggacagttgaaacag
aagaaagaaaaattgacaacagaattaaaagaaatgtctaaaaagaagagaaaagaatca
gaattaaatactattcgttcacagattaaaggtcttgagacgagattgaaatattccatt
acagacagggataatacacaaaataaacatctaacacagaatgagaaagatctgagaaat
tataaggaacaaatccactcatttgagcctagaatgcatcagttagagagatctatgaat
gaaagggaggacacgataaaagcattgaaggatagaatgaacagggtagaagatgaattg
tttgaagatttctgtgcccagattggtgtggaaaatatcagacagtatgaagagagagaa
ttgttagtacaacaagaaagagccaagaaacgtttggaatttgagaaccaaaagttcaaa
ctgcagaaccagatagaatttgaacggtccagagatactctcgctaatgttatgaaatgg
gaaaaggctgtgacagatgatgaaaaagaattggagaaagtgaaaaatgacgaggcaaga
aatatggagacgatagacagagagatgcagaaagcagatagatgtaaacaacagagactg
actataaagtcacaggttgacgactttgagggacagattaatgagatcaagaaacgactg
aatgcacagaataaagagattgctgcagcacagaaacaagttgctggccacgagacttgg
cttgaacagaaacgtgctgatagacatagtctgctgaaaacttgcaagatggacaacatc
aacctgcctatgagaaagggcacgatggatgacattacacaagagaacgagccgtccagt
gccatggatggtacccagatggatggtacccagtccgagaccgggctcgacagtatgagc
agtaaaggtgcaaagaaaatatacgagaaagaagctttgatcattatagattactctggt
ttagatgacgatctcaaagagattgatgacccatctgaagtgaagaagaatatcgaacaa
atgactaaaggagtatctgatatggtgtctacattacagagaattaatgctcccaatatg
aaagctatggaaaagttagatggtgtaaaagaaaggttaatggaaacttcagaggaattt
gaaaatgccaggaaaagggccaagaaagcaaaacaagcatttgagaaagttaggaaagaa
agatatgacagatttatgcactgttttgatcatgtatccaacaagattgatgaaatatac
aagtccttggcaagaaaccagagtgctcaggtagccgcatatattcgtgaggaatcacaa
aaacatttccagtgtattgtcatctctctcaaggaagaattttacaacagggctgatgct
ctgattggtatatacccagagcaaggggattgtgtaatcagtaatgtattaacattggat
ctgacacagtacgaggacccacaccaatacgaggaagatgatcgtacagctttacttaat
gttagatga
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