Ruditapes philippinarum (Manila clam): 132758245
Help
Entry
132758245 CDS
T09557
Name
(RefSeq) acetylcholine receptor subunit beta-like
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
132758245
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rphi04040
]
132758245
Ion channels [BR:
rphi04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
132758245
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
GBP
Neur_chan_memb
DUF6056
AAA_18
AAA_14
MMR_HSR1
RHD3_GTPase
Motif
Other DBs
NCBI-GeneID:
132758245
NCBI-ProteinID:
XP_060605784
LinkDB
All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MKGRFNTIIYIYIINVFLCSTSFVRCATINDTESLLADLQANYNKNVRPTYDQSQAIQVN
IVMYLKSIQEFDEVQEKFSFVGAMGVVWHDYKMKWDPYQYGGLWVTTLSYNDIWVPELVL
SSPSGKGVSVGKSTDVLRITNYGTVYWYPSDLFQSTCSVNVRYYPFDIQKCTTSFASLGY
KKYEVNLTHGQETVDFSAYSENGLWRVDGSETKTQLLGDGEEMEISFTVHLSRKAAYVVV
NLLMPTVVLSLMNAWVFILVPESGERIGYTITTLLAIAVYMTIVSDTLPKTSEPVPLISY
KLMADLVTSALTVFVTILNARMHLRSDTEIVPNWLQRLYNSLRCVSCCKTERIVPEDESA
GQFKTEDNMKGLRTDKNGIKNPDQEAFVMEQSHNDKTSGQVISRDIMAEGGDDPSRNNVS
VTNTSEEVPEEGDKFTSLPVFQEPLRLVKNEANGSFSIDEDVLNQISQINRTVNVIAITG
PCRTGKSYLMNRLAKNKHGFTLGNGVNSKTKGIWVWCLIHPVYRDQVMVLLDTEGIGDAD
KV
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggacgttttaacactataatttatatttacatcataaatgtgtttctttgttca
acctcgtttgtacgatgtgccacgataaatgacacagaatcacttctggctgatttacag
gcaaattacaataagaatgtaagaccgacgtatgatcaatcacaagctattcaagttaac
attgtgatgtatttaaaatctatacaagaatttgacgaggtgcaggagaaattttcattt
gttggagcaatgggtgtggtatggcacgactacaagatgaagtgggatccttatcagtac
ggaggactgtgggtaactacgcttagttataacgatatttgggtcccagaactagttctg
tccagcccatctgggaaaggagtatcggttgggaaaagtacggacgttctccgcattact
aactatggaacggtttattggtacccgtcagatttatttcaaagtacgtgttccgttaac
gtaagatactatccgtttgatattcagaagtgcacaacttcatttgcttcccttggatat
aagaaatatgaggtaaatcttacccatggccaagaaactgtagatttttcggcctactca
gaaaatggattgtggagagttgacggttccgaaacgaaaacacaacttttaggagatggt
gaagaaatggaaatcagtttcactgttcaccttagtaggaaagcggcatacgttgtagtc
aatctactaatgccaactgttgtgttaagtttaatgaacgcttgggttttcattctggtt
cccgagtccggcgagagaattggatacactatcacaacgcttctagcaattgccgtctat
atgactatagtgagtgatacacttcccaaaacctcggaaccagtgcccttaatttcttac
aaattaatggcggatttggtaacaagcgcacttactgtgtttgttacaattttgaacgca
cgcatgcatttaagaagcgatactgagatagttccaaactggttgcagcgtttgtacaac
tctctaagatgcgtcagttgctgtaaaaccgaaaggattgttccagaagacgaaagtgct
ggtcaatttaaaacggaagataatatgaagggtctacgcacagacaaaaacggtattaaa
aatccagatcaagaagccttcgtcatggaacaatcgcacaatgataaaacaagtggacaa
gtcatatcacgtgacattatggcagaaggaggtgacgatccgtcgcgaaacaatgtgtct
gttaccaacacgtctgaagaggttccagaagagggggacaagtttacatcacttcctgtg
tttcaggaaccactacgtcttgttaaaaacgaagcaaacggtagtttttcaattgatgaa
gatgtcttgaatcagatttcacagatcaatagaacagtgaatgtgattgcgattactgga
ccatgcagaactggcaaatcctacttgatgaacagattagccaagaataaacatggattt
actcttggaaatggagtgaattcgaaaacgaaaggtatttgggtgtggtgtttgatacac
cccgtctacagagatcaagtgatggttctcctcgatactgaaggaatcggagatgcagac
aaggtttaa
DBGET
integrated database retrieval system
