Ruditapes philippinarum (Manila clam): 132758295
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Entry
132758295 CDS
T09557
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-6-like
KO
K04808
nicotinic acetylcholine receptor alpha-6
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
132758295
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rphi04040
]
132758295
Ion channels [BR:
rphi04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
132758295
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
132758295
NCBI-ProteinID:
XP_060605853
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MLRIGYVGAVLTAASLVTFIDAQTIDDVSQLHKTVMSGYNKDIRPAIDQSQPVFVNVSFE
LISIRELDEIMEKISIVGILWMFWEDPRISWNPLAYNNTFMTKISNQNVWKPDLILAHPI
DMTKAIGFDHSWYPVRYNYNGIALWAPGDVMTTTCNIDITFYPFDKQSCEVTFIPWGSRK
SEMFIHVAEKEVSRKLFSENGVWKLKKATTVTGLIDNMYPTYSVVIELQRRPTYIIVNAV
LPVLFMGLLNALVFYLPANSGERVSFAITILLAIAVFLTLVGDNMPKTSQPMSILCYFLL
TNLVLSSLIMVVTVVNLRIYYKETEVPRWLRSCVLILKCKRKFRYTNDTKVEALTESKDA
DVKKSPEVVVKDNWVTESDDTESITWRDVSETVDLVFGISAIVWLCLTALVFFSMVSTQI
LPEN
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgttgagaattggttatgttggtgcagttcttaccgcggcatctctcgtgactttcatt
gatgcacagacgatagatgatgtcagtcagttacacaaaactgtaatgtctggttataac
aaagatataagacctgctattgaccaatcacaacctgtctttgtcaatgtctcatttgaa
ctcatatcaatacgagaacttgacgaaatcatggaaaagatatcaatagtaggaatatta
tggatgttctgggaagatccaagaatttcatggaaccctttggcatataacaacacattt
atgacaaaaatatcaaatcaaaatgtttggaagccggatttaatccttgctcatcctatt
gatatgacaaaggcaattggttttgatcacagttggtaccctgtgcgctataactacaat
ggaattgcactttgggcccctggtgatgtgatgacgacaacgtgtaacattgatataaca
ttttacccctttgataaacaaagctgtgaggtaactttcattccatggggatcaaggaaa
agtgaaatgttcatacacgtagccgaaaaggaagtttctagaaaattattttcggaaaat
ggagtatggaaacttaaaaaggcaacaactgtaactggtctaattgacaatatgtacccc
acctacagtgttgtaattgaacttcagagaaggcccacgtatataatcgttaacgccgtg
ttacctgtattgtttatgggactgctgaatgctcttgttttctatttacccgctaattca
ggggagagagtttcttttgctatcacaattttgcttgcaatagccgtttttctaacactt
gttggtgacaacatgccgaaaacatcacagccaatgtcgatattatgctattttctcctc
acaaatctagttcttagctccttgatcatggttgtaacggtggtaaatcttagaatttat
tacaaagagacagaggttcctcggtggttgaggtcgtgcgtgcttattttgaaatgcaag
cgaaaattccgctatacaaacgatacaaaggtggaagctctaacggaaagtaaagacgca
gacgtaaagaaatcaccggaagtagttgttaaagacaactgggtcaccgagtctgatgat
acagagtctattacctggcgtgacgttagtgaaaccgtagatcttgtattcggtatcagc
gccattgtatggctgtgcctgactgcattggtgttttttagcatggtatcaacacaaatt
ctaccagaaaactaa
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