Ruditapes philippinarum (Manila clam): 132758387
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Entry
132758387 CDS
T09557
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rphi03000
]
132758387
04121 Ubiquitin system [BR:
rphi04121
]
132758387
Transcription factors [BR:
rphi03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
132758387
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
132758387
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
Motif
Other DBs
NCBI-GeneID:
132758387
NCBI-ProteinID:
XP_060606044
LinkDB
All DBs
Position
Unknown
AA seq
570 aa
AA seq
DB search
MTRIKARLLRIPTATRAPKAEHISNDVNKPNINNSYKICDSDYWDKVPQLQVSNDSVTVS
TSRYTSSNISMKSDFPSLPSLPSMQLSDQKDQVTVQITLQQLEQTTVPSLFNKHKPFSLN
SSQATTISQGIAEYIVTDLKPLTTAEGEGFRNLVKLLKPRYNIVSRNHLLEKYIVPMYHN
TVDQVKRDLEKGMRHAFTTDGWTSINAESYITTTCHYIDITTFQLCSKALDTKCVHISHT
SENLAQEMKVCINKWNLQDPVGVTDNAANIVNACNIAELPHVGCFGHTLNLAVNRCLAVN
EVSALIGKCKKLVSVFKQSCLKASALHEAQISLDLKQLQVIQDVDTIWNSALAMIKRLLE
TMPAIWTALYKDKKYSHLLPSDIDRKNMEDLKDLLSPVEEATIRVSAEKSATASLILPMM
ESVVQSPESVQSENPNADVIDVKDENLNLVKKPKLDASDDDFFDVLLIKEEKSSESNQSV
MKAEIERYKTETVSMKQDPIEWWKIKREIYLNLSTCACKYLHIPATSVPSERVFSTAGNI
LNKKRGQLTADNVDMLLFLYHNYKKVMLLQ
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgactagaataaaggctcgattacttcgtataccgacagctaccagagcaccaaaggct
gaacatatttccaatgatgttaataagccaaacataaataattcatataagatatgtgat
tccgattactgggacaaagtccctcagcttcaagtgagcaatgattctgtgacagtcagt
acgagtaggtataccagcagtaatatctctatgaagtctgattttccatcactaccaagt
ctaccatcaatgcaattatcagaccagaaagatcaagtaacggttcaaattacactccaa
caacttgaacaaacaacagttcctagtctttttaacaaacataaaccattttctctcaat
tctagtcaagcaacaacaatttctcaaggaattgctgaatatatagtaacggatttgaag
ccattaactacagctgaaggtgaaggatttaggaacttggtaaaattactgaaaccccgc
tataatattgtatcaagaaatcatttgcttgagaaatacattgtgcctatgtatcataat
actgttgatcaagtcaaaagagatctagagaagggtatgcggcatgcttttacaacagat
ggttggacatcaattaatgctgaaagttatattacgacaacatgtcactacatagacata
actacttttcagctttgttctaaagctcttgacacaaaatgcgttcatatcagtcataca
tctgagaatcttgcccaggaaatgaaagtttgtattaacaaatggaacctgcaagatccg
gtcggtgtaaccgacaatgctgcaaatattgtaaatgcatgcaatatcgctgaattacca
cacgtgggctgttttggacacacattgaatttagcagttaacagatgtcttgcagttaat
gaagtaagtgccttgattgggaagtgtaaaaagttagtatctgtgtttaaacaaagctgt
cttaaagcaagtgcccttcatgaagctcaaatttcacttgatttgaaacagctgcaggtt
atccaagatgtagataccatttggaactctgcactcgcaatgattaaaagacttttagag
actatgcctgccatttggacagcattatataaagacaaaaagtattctcacttgctgcca
agtgatatagataggaaaaacatggaagatttaaaagatttgcttagtccagtagaagaa
gcaactataagagtatctgctgaaaaatctgcaacagcaagtttgattctgcccatgatg
gaaagtgtagttcaaagccctgagtcagttcagtctgaaaacccaaatgcagatgtaata
gatgtaaaggatgaaaatcttaatctggtgaaaaaaccaaagttagatgcttcagatgat
gatttctttgatgttctgttgataaaagaggagaaaagttcagaatcaaaccaatctgta
atgaaagcagaaatagagagatataaaacagaaacagtgtccatgaagcaagatcctatt
gaatggtggaaaataaagagagaaatttatcttaacctttcaacttgtgcttgtaaatat
ttacacattcctgctactagtgttcctagcgaaagagttttctcaacagctggaaacatt
ttgaataagaaaagaggccagctcacagctgataatgttgacatgcttttattcctgtac
cataattacaaaaaagtgatgctattgcagtaa
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