Ruditapes philippinarum (Manila clam): 132758548
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Entry
132758548 CDS
T09557
Name
(RefSeq) acetylcholine receptor subunit beta-like
KO
K04808
nicotinic acetylcholine receptor alpha-6
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04080
Neuroactive ligand-receptor interaction
rphi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
132758548
04082 Neuroactive ligand signaling
132758548
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rphi04040
]
132758548
Ion channels [BR:
rphi04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
132758548
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF6056
Motif
Other DBs
NCBI-GeneID:
132758548
NCBI-ProteinID:
XP_060606207
LinkDB
All DBs
Position
Unknown
AA seq
436 aa
AA seq
DB search
MEFRGEITVFGVHRYLITLYFIIGVMNAATITEMENLHTSLFTGYNKNVRPITDQNSAID
VTIFMYIKSIREFDEVDEKFSFVAALQFIWMDEKLLWDKSINGGIEQITVSYDDVWVPEL
TLSSPSSKGSTIGKSSDRIRVNEEGEMEWMPAGLIESTCSVNAQKFPFDIQSCDTSFTSL
GYKSNEVNLQAGFPNVMLNVYSPHALWDITASEVKTVILGSGNESEITFTIQLKRDAVFA
VVNIIMPILILSLLNVLVFLLVPESGERIGYCITTLLAIAVYMTIVNDLLPQTSQPVPLI
SYKLMIDLLISALIVFVTIINMRLYNKDDNNSVPNWLKSIYRFLTCTGRKTHPDETEEVK
QRSEIKFKGTGTTVMQENASKCKTKDCSGELKNKQERKDDPITWKQISYMVDWIALFTCI
FLTVMNMIIFLGMATS
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggaatttagaggagagataacagtgtttggtgtacatagatatttgataactttgtat
tttataataggagttatgaatgcagcaacaatcacggaaatggagaatcttcatacgtca
ttattcactggttataacaaaaatgtccgaccaataacggaccaaaactcggctatagat
gttacaatttttatgtatataaagtcaattagggaattcgacgaagtcgatgaaaagttt
tcctttgtagctgcattgcagtttatatggatggacgaaaagttactttgggacaaaagt
attaatggcggtatcgagcaaataactgtgtcctacgatgacgtatgggtaccagaactg
actttgtcaagtccttcctcaaaaggatcaacaataggcaaatcttctgacagaatccgt
gttaatgaagagggtgaaatggagtggatgccagcgggtctcattgaaagcacatgtagc
gttaacgctcagaaatttccatttgatattcagagttgtgacactagctttacttctctc
ggttacaagagtaatgaagtgaatcttcaagctggatttccgaacgttatgttaaatgta
tactctcctcatgccttatgggatataactgcatcagaagttaaaacggtgatattagga
tctggaaatgagtctgaaataacattcactatacagttgaaaagggatgcagtttttgca
gtggttaacataataatgcctatattaatactaagcttattaaatgttctcgtgtttctt
cttgttccagaatcgggcgaacgtatagggtactgcattacgacacttctcgcaattgct
gtttacatgaccattgtcaatgatttactgccccaaacttcacagccggtaccgctcatt
tcctacaagttgatgattgatttgcttatcagcgccctgatagtttttgtcaccatcata
aacatgcgactatataataaagacgataacaatagtgtaccaaattggctgaagtctata
tatcggtttttaacctgtactggcagaaagactcatccagacgaaaccgaagaagtcaaa
caaagaagtgaaatcaaatttaaaggtaccggtactactgtaatgcaagaaaacgcatct
aaatgtaaaacaaaggactgttctggcgagctgaaaaataaacaagagagaaaagacgat
cccataacatggaaacaaataagttatatggttgactggatcgccctgtttacatgtata
tttttgacagtgatgaatatgatcatttttctgggaatggcaacgtcgtaa
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