Ruditapes philippinarum (Manila clam): 132758653
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Entry
132758653 CDS
T09557
Name
(RefSeq) LOW QUALITY PROTEIN: condensin-2 complex subunit D3-L-like
KO
K11491
condensin-2 complex subunit D3
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rphi03036
]
132758653
Chromosome and associated proteins [BR:
rphi03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin II
132758653
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cnd1
HEAT
HEAT_2
HEAT_EZ
Cohesin_HEAT
TPR_HPS5_insect
Motif
Other DBs
NCBI-GeneID:
132758653
NCBI-ProteinID:
XP_060606325
LinkDB
All DBs
Position
Unknown
AA seq
1049 aa
AA seq
DB search
VRARGIACLTPCFGSRDEGIAGILREIVTPQVTATGRPNQPRLIKTPGATRGQDTVTIAD
ETSQRSEVTIAQQTIEGASTVDRSAEGGTRPKDTPMHHVNLTPGVNLNLTNSKGVFSMLR
SRLNDSKQNVRKAAVQALEAAVRFEMPNFTKENLEALTKHYRDPVLSVRKQVFQSLTDLL
MDNPKDTILQSNWLLAALPLVMDRETTVSEKCMDTLEEVLIRNIVAYQRSKSDRHQLAWD
LLHIIALPENVDKRRYLQKACRHWSRQGKIKSALMQALKTHIGTCNNAAGWMLLAEVAPA
APEITHGFLLEYWQNEGSQEKCYETMNRVLTVMKYVAKHMSTQERDILITDLNDRLMKFE
SPPDLISVSISTLSKLCTEQAKALKKPSLETEWSWQLLTTCDKYLSSVVLEGHDGVVNDE
DKVVSHLFTLGEVVQLFPGKVPKRVNLLVQSMIAAPCITSPPASQPHIHTDQSSQGEEDS
RDSQGSSQQASQPLTQFRGCVMSNRIRAFAFVTLGKLCLQNEELAKKCIAALARELEISK
DPAIRNNVVIIMSDLCVRYTTTANAYISNIASCLKDPSQLVRKQTLTVITRLLQEDYIKW
KGALFYRFISTLLDTCDEIKAFAEFCLLHMLIQRNPNMFFQHFVECLFHFNDYKKHTIYN
KFTQSNKDREMFSXMEKRIKSKKRMTLYKFLLENMTDNHRFQLKTKLTQEILGETVDDIL
PINDETKDVLKDALAILSCKEIKLTSLRKLTNEKVVGDSEEMAEAVAATAKKTIMTKVLK
NDVVENIVPVVISLKHKLEEKRSPLQKDLLLYLRELMKDYKKEVKEVLSADRRLATEIEF
DLRKLSEEEEQGQNERNTPTVLPASPTVRPGMSPRPGFQSPQRNAGASPGPHVSPRTPAL
KSASRLTPARPVGSPKTPALKTAVASPRPSTSKGTPPIVRIGPDRNTPARRTPLATIAVL
NSMRHTPSAGDAVVKNTPIKPTEETKDAGSPKSGKTPSKNMRSRRAISTPSAYHINITFD
EEANMTFLPPSPIAETSSDHLLFDSDASM
NT seq
3151 nt
NT seq
+upstream
nt +downstream
nt
tgttcgagcaagaggtatagcatgtttgacgccatgttttggttctcgagatgaaggtat
tgctggaatattgagagaaattgtcacaccacaggttacagctactggtcgaccaaatca
accaagacttataaaaacacctggggcaactagagggcaagacactgttactatagctga
tgaaacctcacagaggtcagaggtcacaatagctcaacagaccatagagggtgccagcac
tgttgacagaagtgcagagggtgggactagacctaaggacacgcccatgcatcatgtgaa
tctcacacccggagtcaacctcaatctgacaaacagtaaaggtgtattctcaatgttacg
tagtagattgaatgatagtaaacagaatgttagaaaggcggcagtacaggctctagaggc
tgcagtgagattcgaaatgcctaacttcacaaaagagaatttagaagcgctaacaaaaca
ctatagggatccagtgctgtctgtaaggaagcaggtgtttcaatcattgacagatttact
gatggacaatcctaaagatactatactgcagagtaattggttactggcagcacttccact
cgtaatggaccgagaaacaacagtatcagagaaatgtatggatactttagaagaagtatt
aatcagaaacatagtggcataccaaaggtcaaagtctgaccgccatcaactagcgtggga
cctacttcatataatagcactgcctgaaaatgttgataaaaggagatatctacagaaagc
atgtagacattggtcaagacagggtaaaatcaagtctgcacttatgcaggctcttaaaac
tcacataggaacatgtaataatgctgctggatggatgttgctagccgaggtagctccagc
agctcctgagataactcatggtttccttctagagtattggcagaatgagggatcacaaga
gaaatgttatgagactatgaatcgagtattgactgtaatgaagtatgttgccaaacacat
gtctacacaagagagggatatactgattacagacctcaatgacaggctgatgaagtttga
gtcaccacctgaccttatctcagtctctattagcactttatcaaagctatgtactgagca
agcgaaggcgttgaaaaagccgtcattggagactgagtggtcgtggcaactactaacaac
ttgtgataaatatctatctagtgttgtactggaaggacatgatggtgttgtgaatgatga
ggacaaggttgtgagtcatctgtttacattaggtgaggtggtgcagctgtttccagggaa
ggttcctaaaagagtaaacttgttagtacagagtatgatagctgccccttgtataacctc
acctccagctagccaaccacacattcatactgatcagtcaagtcaaggagaagaagactc
aagagattcccagggtagctcacagcaggcgtcacagccacttacacaattcaggggttg
tgtcatgtctaacagaatcagagcttttgcatttgttactctagggaagttatgtttgca
aaatgaagaattggcaaagaaatgtatagctgcattagctagggaactagagatatctaa
agatcctgctataagaaacaatgttgtgattataatgtcagatctatgtgtcaggtacac
aactactgcgaatgcttatatatcaaacattgcatcatgtttgaaggatccgtcacaact
tgttcgtaagcagactctaacagtgataactcgtctgttacaagaagattatattaaatg
gaaaggcgctctcttctatagatttatatctacactcctagacacgtgtgatgaaattaa
agcttttgcggagttttgtcttctacatatgttgatacagcgaaacccaaacatgttctt
tcaacattttgtggaatgtctgttccattttaatgattacaagaagcacacaatttataa
caaatttacacagtcaaacaaggatcgtgagatgttttcatgaatggagaaaagaataaa
gagtaaaaagaggatgactttatacaagttcctacttgagaacatgaccgataaccacag
gttccagcttaaaactaaacttacacaggagattctgggagagacagtagatgatattct
acctataaatgatgagactaaggatgttctgaaagatgctctagctatacttagctgcaa
ggagataaaattaacctccctgaggaagctgacaaatgagaaagttgtcggtgacagtga
ggaaatggctgaggctgtagcagcaacagctaagaagacaattatgaccaaggttttgaa
aaatgatgttgtagaaaacatagtgcctgtagtgatttctctgaaacataagttagagga
gaagagatctccactacagaaggacttgttgttatatctacgggaacttatgaaggacta
caagaaggaagttaaagaggtactgtctgcagatagaagattagctacagagatagagtt
tgacttaagaaagttatcagaggaggaagaacaaggacagaatgaaagaaatactccgac
tgtcttaccagcttcccctacagtaagacctggtatgagtccaaggccgggattccagtc
acctcaacgtaatgcaggagcttctcctggacctcatgtgtcaccaagaactccagcgtt
gaagtctgctagtagacttacccctgccagaccagttggaagtcccaaaacaccagcttt
aaagactgcagtggcatcacctagaccaagtacctctaaaggtactccacctatagtacg
aataggaccagacagaaatacacctgccagacgcacaccacttgcaactatagcagtgtt
gaattctatgagacatacacctagtgcaggtgatgctgttgttaagaatacaccaattaa
acctacagaagaaacaaaggatgctggttctcctaaatcgggaaaaactcctagtaaaaa
tatgcgctcgcgacgggccattagtaccccgtcggcttaccatattaatataacatttga
cgaggaagcaaatatgacgttcttgccaccatctcctatagcagagaccagttctgatca
tttgttgtttgactctgatgctagtatgtag
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