Ruditapes philippinarum (Manila clam): 132758778
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Entry
132758778 CDS
T09557
Name
(RefSeq) ubiquitin-like modifier-activating enzyme 1 isoform X1
KO
K03178
ubiquitin-activating enzyme E1 [EC:
6.2.1.45
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132758778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rphi04121
]
132758778
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rphi04147
]
132758778
Enzymes [BR:
rphi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.45 E1 ubiquitin-activating enzyme
132758778
Ubiquitin system [BR:
rphi04121
]
Ubiquitin-activating enzymes (E1)
Ubiquitin activating enzyme
132758778
Exosome [BR:
rphi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132758778
Exosomal proteins of other body fluids (saliva and urine)
132758778
Exosomal proteins of colorectal cancer cells
132758778
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA_E1_SCCH
ThiF
E1_UFD
E1_FCCH
E1_4HB
NAD_binding_5
Motif
Other DBs
NCBI-GeneID:
132758778
NCBI-ProteinID:
XP_060606462
LinkDB
All DBs
Position
Unknown
AA seq
1046 aa
AA seq
DB search
MSSSIDQEPAAKKQKLDTSESSNFNLKSKEMAKNSQNGVEGEIDEGLYSRQLYVLGHAAM
RRMQSSNVLICGMKGLGVEIAKNVVLAGVKSVTIHDSCKATWTDLSAQFFLREEDIGKNR
ADVTLPRLAELNSYVPCNCYTGQLTDSYLKDFQVVVLTDSSLEEQVRVGEFCHANDIKFI
VAETRGLFGMIFCDFGEEFVVSDMDGEQPISNMIADIDEDGVVTCLDETRHGYEDGDYVQ
FKEVQGMTELNGHEPMKIKWLGPYTFSIGDTKKFSPYQKGGIVTKVKMPTTIKFKSIKEA
VNAPEFVMTDFAKFDRPGQLHIAFQTIHEYIKQKADLPRSRSKEDAGEFMKIFNEINSKS
GAKCDDIDESLINEFSFGARGDLCPLAAVIGGITAQEVMKACSGKFNPVFQYLYFDALEC
LPQENRDEILTEESCKQNNNRYDGQTAVFGQEFQNKLNNLKYFLVGAGAIGCEMLKNWAL
MGVACGEGGMVYVTDMDIIEKSNLNRQFLFRPWDVSKHKSSTAASAAKVMNPALKITAQE
NRVGQDTENIYTDDFFEQLDGVANALDNVDARMYMDRRCVYYRKSLLESGTLGTKANVQV
VIPHLTESYSSSQDPPEKSIPICTLKNFPNAIEHTLQWARDTFEGEFKGPIETANLYLTD
PKFLERTFKLQGTQPIETLDTVRKVLVDNRPSSFEDCVTYARKVFQENYDNQIQQLLFNF
PSDQVTSSGAPFWSGPKRCPHPLKFDSNNDVHLDFVASAANLKAEIYGLKQVRDRAAIKA
MVDKIVVEEFKPRSGIKISVTDADLEANANNGNFDTDDIQKLKDSLPSPASMKGFLLRPV
EFEKDDDSNFHMDFIVSCSNLRAENYDIPPADRHKSKLIAGRIIPAIATTTAMVVGLVCL
EMYKIVQGHKKLELFKNGFCNLALPFFAFSEPIAAPKNKYYDKEFTLWDRFEIQGEMTLQ
EFVDHFQNDHKLEITMLSQGVTMLFSFFMPAAKRTERMPLPISEVVKKVSKKKIPSYVKA
LVLELCCNDTDGEDVEVPYVQYRLPQ
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtagtatcgaccaagagcctgcagctaagaagcaaaaactcgacacttctgag
agttcaaacttcaatttaaaatcgaaggagatggcaaagaattcccagaatggtgtagag
ggagagatagatgaagggctgtactcaaggcagttgtatgttttgggtcatgctgccatg
agacgtatgcagtcctctaatgttttgatatgtggtatgaaaggtttgggtgttgaaatt
gccaaaaatgttgtgttggctggtgtaaagtcagttacaattcatgattcttgtaaagct
acatggacagatctctctgcacagtttttcttacgtgaggaagatataggaaagaaccga
gctgatgtaacactgcctagattagcagaactgaacagttatgttccttgtaactgttat
actggacaacttacagactcatacttgaaagattttcaggtggtggtattgactgactcc
agtttggaagagcaggtcagagtgggagaattctgtcatgctaatgatataaagtttatt
gtggctgaaacacgtggactttttggtatgatattctgtgattttggagaagagtttgtt
gtgtcagatatggatggagaacaaccaatcagcaacatgatagcagatatagatgaagat
ggtgtagtaacatgcctggatgaaacaagacatggatatgaagatggagattatgtgcaa
tttaaagaagtacaaggaatgactgagcttaatggtcatgaacctatgaaaatcaaatgg
ctaggaccatacacattcagtattggagacacaaaaaaattctcaccgtaccaaaaggga
ggcatagttaccaaagtaaaaatgccaacaaccatcaagtttaaatccataaaggaggca
gtgaatgcaccagagtttgtcatgacagattttgccaagtttgaccgtccaggtcagctc
catatagctttccagaccatacatgaatatatcaaacagaaagctgatttacctagaagt
agaagtaaggaagatgctggagaattcatgaaaatattcaatgagatcaatagtaaatca
ggagctaaatgtgatgatattgatgaaagtcttataaacgagttctcattcggtgcacga
ggtgacctgtgtccattagctgctgttatagggggtataactgcccaggaagtgatgaag
gcatgttctggcaagtttaacccagtattccagtatttatattttgatgccctggagtgt
ctaccacaagaaaatagagatgaaattcttactgaggaatcttgtaaacagaacaacaac
agatatgatggacagacagcagtgtttggtcaggagttccaaaataaacttaacaacctg
aaatatttcctggttggagctggagctattggatgtgagatgttaaagaactgggcactg
atgggtgtagcttgtggtgaaggtggaatggtctatgtcactgatatggacatcattgaa
aaatctaatcttaacagacagtttctgttcagaccatgggatgtatctaaacacaagtca
tcaacagcagcatctgcagcaaaggtgatgaaccctgccctcaagataaccgcacaggaa
aaccgggtcggacaggatactgaaaatatttatactgatgatttctttgaacagctggat
ggtgtggccaatgcccttgataatgttgatgctcgtatgtatatggacagaagatgtgtg
tattacagaaaatctttgttagaatctggaacactgggtactaaagcaaatgttcaggta
gttataccacatctgacagaatcatattcatcatcacaagatcctccagagaagtctata
ccaatctgtacactgaagaactttcctaatgccattgaacacaccttacagtgggcaaga
gacacattcgagggcgagtttaagggaccaatagaaacagccaatctttatttaacagat
cctaaatttcttgagagaacttttaaactacaaggaacacaacctattgaaacattggac
acagttcgtaaagtgttggtggacaataggccgtcaagttttgaagactgcgtgacctat
gctagaaaagtttttcaagaaaattatgataatcagatacagcagttattgtttaatttc
ccatcagatcaggtgacaagttctggggcaccattctggtctggaccaaaaagatgtccc
catcctctaaaatttgattctaataatgacgttcatttagactttgttgcttctgctgcc
aatctgaaggcagaaatctatgggttaaagcaggttcgggacagagcggcaatcaaggct
atggtagataaaatcgtggtagaagagttcaaacctcggtctggcatcaagatatcggtg
acagatgctgatcttgaggccaatgccaacaatggaaactttgacacagatgatatacag
aaattaaaggatagtttaccttcaccagccagtatgaagggatttttgttacgtccagta
gaatttgagaaggatgatgacagtaactttcacatggactttattgtatcatgttctaat
cttagagcagagaattatgacattccacctgcagacagacacaagagtaagctgattgct
ggtagaattattccagctatagcaacaacaacagccatggtggtaggattagtttgtctg
gaaatgtataagatcgtacaagggcacaagaagttagaattattcaagaatggattctgt
aaccttgctttacctttctttgcattctcggagccaattgctgcacccaaaaataagtac
tatgataaagagtttacattgtgggacagatttgagatacagggtgaaatgacgctgcag
gaatttgttgatcatttccagaatgatcacaagttggagattacaatgttgtcacagggt
gtaacaatgctcttctctttcttcatgccagcagccaaacgaactgaaagaatgccacta
ccgatatctgaagtggtaaagaaagtctcaaagaaaaagattcctagttacgtgaaagcg
ctggttctagaattgtgttgtaatgatactgatggtgaagatgtggaagttccatacgta
caataccggctaccacaataa
DBGET
integrated database retrieval system
