Ruditapes philippinarum (Manila clam): 132759374
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Entry
132759374 CDS
T09557
Name
(RefSeq) AP-4 complex subunit epsilon-1-like
KO
K12400
AP-4 complex subunit epsilon-1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
132759374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132759374
Membrane trafficking [BR:
rphi04131
]
Endosome - Golgi transport
Others
AP-4 complex
132759374
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
INTS1_R4
HEAT_2
RasGEF_N_2
RIX1
SPG48
Motif
Other DBs
NCBI-GeneID:
132759374
NCBI-ProteinID:
XP_060607122
LinkDB
All DBs
Position
Unknown
AA seq
947 aa
AA seq
DB search
MSNKSFSVLPKFFGNLVGTSPPTEKSIEGISRGFELFVQSVHRAKNKYDEQQIVNRELQT
IKSSIGDASQAQMRDYLWRLVYARMIGYDVEFGCIEGAKLAGRMDPIDSKTGFMISCLLM
NRTDEITLLLMCTFQKNITSSNLLEILMGLSACSQLTAVHSIPYILDGVLSNLKHSRELV
RQKAVLCLHQFQLLAPDLLEHRQEDLERMLYDKDPGVMAAAVHIIQHAIERDPTRCQRFG
ETLVSILTQISSHKMASMFEYQSVPFPWLQVQIIKCLTKLAKQDESFAASLVPFLKEILQ
RTSRKEMIALSIVYECLQCILSINPPKHLLDVAAVNIRGFILSSNANMKFIGVKLLTMLV
RVNPKYAFDYQQLIVQSLDNPDTNVQRKTHKLLYEITNETNVTTVCAKLFTQLQTSSDKF
WRSEVITMVLNILERYDGDVGWRVERLFTCLQLGNDIIEDTTLKSMMCLIEEKFMLYGAD
ERRQKLLVQKCVEVLVNKNSPTTSLHIATWVLGELCPILKNMPDDKVISLFTRHLGNEKL
GYSTQSCIVTALQNLVIKGVVNCDNMSTKINECLMEQLPIVIKQSLSVLLGVCKYGLTIT
FSGNIDTTLTFLDDLVTDDLEQGGKAYIPPHLRGVTSEPEASPGLFSGVMSEPTGQDDTY
SSGRPRTESNSSSMKTAEESESVLKVPSVKRVWGKQGRLDISPKTNMETSSLTTSVQTEE
EKRQQELASALFGGFQSTEENDVEELSGFLSGSSDTANWRNLHTSATRTNTIEQSTEQST
CIGQQDLCNDKISDIETVKNTAQDSFTDNSSSCDTGLLHVDTEHISIFSESETLVQVEQK
EPLFGNGNNFGENSLDCFDIKDRVDDKDKAISSDNDLEQAFSALFDSRSNESKGMQASGV
DKSIVQTEFGASSEQITGSRENTENGIGGVDNNNELRTNNSIYDETW
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataagagtttttcagtattgccgaaattcttcggaaacttagttgggacttcc
ccacccactgaaaaatctattgagggaatatcacggggattcgagctgttcgttcagtca
gttcacagagcaaaaaacaaatatgatgagcaacagattgtcaacagggaattgcagaca
ataaagtcaagtataggagatgcatctcaggctcagatgagggactacctctggaggctg
gtatatgctaggatgataggttatgatgtggagtttggttgcattgaaggtgcaaagctt
gccggacgtatggatcctattgacagtaaaacaggttttatgatcagttgtcttctaatg
aaccgaactgatgaaatcaccttgctacttatgtgtacattccaaaagaatataaccagc
tctaaccttctagaaatattaatgggtttgtcagcatgtagtcagctgacagcagttcat
tcaataccctacattctagatggagtcctatctaatctaaaacattcaagagagttagtg
agacagaaggctgtgctatgtttacatcagttccagttacttgcccctgatttgttggaa
catagacaggaggatttagagagaatgttgtatgataaagatccaggtgtcatggcagca
gctgttcatatcattcaacatgctatagagagagaccctacaagatgtcaaagatttgga
gagactctagtgtctatactcacacagatttcttcacacaaaatggcgagcatgtttgaa
tatcaatctgtgccgtttccatggttacaggttcagataattaaatgtctgactaaactt
gccaaacaggatgaaagctttgctgcaagcctggtaccatttttgaaggaaatattacaa
agaacaagcagaaaagaaatgattgcattatctatagtatatgaatgtttgcaatgtata
ctgagtatcaacccaccaaaacatctattagatgtagctgccgtgaatatcagaggcttt
atattgtctagcaatgctaatatgaaatttataggtgtaaagttactgaccatgttggtg
agagtgaacccaaaatacgcgtttgattatcaacagcttattgttcaatctttggataat
cctgatacgaatgttcaacgaaagacacacaaactgttgtacgagataaccaacgagaca
aatgtgacaacggtttgtgccaaactatttacccaattacagacatcttctgataaattc
tggaggtcagaggtcatcactatggtacttaatattctagagaggtatgatggtgatgtt
ggatggagagtagagagattgtttacatgtttacagcttggaaatgacataatagaagat
acaacgctgaaatcaatgatgtgtttgatagaagaaaaatttatgttgtatggagcagat
gagagaagacagaagttactggttcagaaatgtgtggaagttcttgtaaataaaaattct
ccaactaccagcctgcatatagcaacatgggttttaggagagttatgtcccattttaaag
aatatgccagatgacaaagtaatctccctttttacacgtcatctgggtaatgagaagctt
ggatattcgacacagagctgtattgtaactgcattacagaaccttgtgataaaaggggtt
gttaattgtgataatatgtcaacaaaaataaatgagtgtttaatggaacagctacctata
gtgataaaacagagtctttctgtgttactaggggtgtgtaaatatggtctgacaattacc
ttcagtggaaacattgatacgaccttaacctttttggatgaccttgtgactgatgacctt
gaacaaggtggaaaagcttatatacctccacatctgagaggtgttacttcagagcccgag
gcttcacctggtttattcagtggtgtaatgagtgaaccaactgggcaagatgacacctat
tctagtggaagacctagaactgaaagtaactcttcctcaatgaaaacagcagaagaaagt
gaaagtgtcctcaaagtaccaagtgtaaagagggtatggggaaaacaggggagattggac
atttctcctaaaaccaacatggaaacgtcttccttaacaacaagtgttcagacagaggag
gagaagagacagcaagaacttgcttcagcattatttggaggattccagtctactgaagaa
aacgatgtagaagagttaagcgggtttctttccggctcctcggacacggctaattggaga
aatcttcatacctcggccactagaacaaatactatagaacaatcaactgaacaatctaca
tgtataggccagcaggatttgtgcaatgacaaaatttcagatatagaaacagtgaagaat
actgctcaagatagctttacggataacagtagtagttgtgacacaggtttactacatgta
gatacagaacacatcagtatttttagtgaaagtgaaacactagtacaagtagagcaaaaa
gaaccgttgtttggtaatggaaataactttggagaaaattctttagattgttttgatatc
aaggatagggtagatgacaaggataaagcaatttctagtgataatgatttagagcaggcc
ttttctgctctctttgatagtaggtctaatgaaagtaaaggaatgcaggccagtggtgtt
gacaagtccattgtgcagacagaatttggtgcttcttcagaacagattactggttctaga
gaaaacacagaaaatggtatagggggtgtagataataacaatgaactaagaacaaataat
tcaatttatgatgaaacttggtga
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