Ruditapes philippinarum (Manila clam): 132759484
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Entry
132759484 CDS
T09557
Name
(RefSeq) THO complex subunit 7 homolog
KO
K13176
THO complex subunit 7
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03013
Nucleocytoplasmic transport
rphi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132759484
09122 Translation
03013 Nucleocytoplasmic transport
132759484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132759484
03041 Spliceosome [BR:
rphi03041
]
132759484
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
132759484
Spliceosome [BR:
rphi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
132759484
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
THOC7
OVT1
Peptidase_S10
PAS_GdpP
NPV_P10
XhlA
Exonuc_VII_L
CENPH
Motif
Other DBs
NCBI-GeneID:
132759484
NCBI-ProteinID:
XP_060607244
LinkDB
All DBs
Position
Unknown
AA seq
203 aa
AA seq
DB search
MASVTDDEVIKKRLLIDGDAGNDEKRLTSLLKTFIRWCNSTDEPSSDESHLTVQRMLATL
AQSDHAIQKSSQVYRMNLLEQENYETLNKQIESRIEEAELKIKESKEELKMAKQIRKHRQ
EYDALAKVIQQQPDRQDTTRKLQDVDEDLKQLEETKKKLEQKLDLRRKQFHVLISAIHEL
QSMLEEDEGMDVSESKQDEMDTT
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagttacagacgatgaggttataaagaaacgtcttcttatagatggtgatgcg
ggcaatgatgaaaagagattgacaagtctgttgaaaacattcattcgctggtgtaatagt
actgatgaaccttctagtgatgaaagtcatttgacagttcagcgtatgttggccacattg
gcacagagcgatcatgctatacagaaatcttctcaagtttatagaatgaaccttctggag
caagaaaattatgaaactctaaataaacaaatagaatccagaattgaagaagctgaactg
aaaataaaggagtcaaaagaagaattaaaaatggctaaacagatcaggaaacacagacaa
gagtatgatgctcttgccaaagttatacagcaacaacctgatagacaggataccaccagg
aagcttcaagatgtagatgaggacttaaaacagttagaggaaacaaagaagaaattggaa
caaaaacttgatctgagaaggaaacagttccatgtattgatatctgccatacatgagcta
cagagcatgttagaagaagatgaagggatggatgttagtgaaagtaaacaagatgaaatg
gacacaacatga
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