Ruditapes philippinarum (Manila clam): 132759503
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Entry
132759503 CDS
T09557
Name
(RefSeq) phospholipid-transporting ATPase ABCA3-like
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
132759503
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rphi02000
]
132759503
Transporters [BR:
rphi02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
132759503
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
R1_ABCA1
AAA_21
DUF4162
AAA_22
AAA_23
Zeta_toxin
AAA_29
MukB
Motif
Other DBs
NCBI-GeneID:
132759503
NCBI-ProteinID:
XP_060607267
LinkDB
All DBs
Position
Unknown
AA seq
1791 aa
AA seq
DB search
MGRKGQHFLLLLWKNFLILKRKPFITFLEIGIPTFFTLILIFIRMRVKGEMKENIGWPEC
ADWDTISTKSDLPRNLAFTPDNNVTRRILERASDTLNFKGIKGFDSEEEMKNFLMFSNST
NNNTYKFLAGVVFTNHFHDDLLPDKIAYKLRFSSSPRNAGKEDNKLFRKDTRWQTEFTFP
IFQRVGPREPYDICGGDPGYVREGFLAVQHAVNFAVLREVGGVNQTDILDSVNVHLKRHP
YPAFNDDNFILVIQQQFPIILMLSFVIVSLVVVKEIVHEKERKLKESMKMMGVDNWLHWA
AWFVKNFLFLLVTVAIMTLFLCIDTNKGPVIGKTDPSILFIFIMIYAISTIAFCFANSVF
FKKANSGAAGGGIFFFVTYIPYFFIQPRYETMTWTQKILTCLLPNTAMAYGGQIIGMYEG
TGSGVQWSNIMDSVSVDDDFTLFHVLIMLIIDIFLCGIITWYVEAVFPGEFGIPQKWYFF
VTSAYWFGTVPDDFVPEDKNISLGQAPEFFEADPVGIRAGIQIRSLRKEFKARDTKKVAV
CGMTLDMYEGQITALLGHNGAGKTTTMSMLTGFMPPSSGTARVNGYDIRKDIRSVRSSLG
LCPQHDVLFDTLTVEEHLIFFGKLKGCSSATIKAEINNMLASVDLENKRHSQAKTLSGGM
KRKLSVGIALIGGSKVVILDEPSSGMDPDARRHIWSVLQKNRAGRTMLLTTHFMDEADLL
GDRIAIMADGAVKCCGTSLFLKNKYGAGYHLTMVKDENCNIDGVSSLINTHIPEAKLDSN
VGAELSYILPHEMSHKFATLFTELDNKKDDLGVTSYNVSTTTMEEVFLRVGETSVGIKEA
KQGKQSVRKGKGRIPLNSNGKNTDEQTPLLKGGAENHTSYSGETRYHRSASFTHNIDKNT
NLVLYLQQFYAMFIKRVLHTFRNQRVTVSQLSVPLFFTITALIVIKTFPGPQDSPALNLT
IDSLGDNVVVFSKIANASIENSFIKFYKEQFKHDLQTETIYVNNQSGFMKDANISDYLLK
VGHDDIGAYNLKYLVGASIEPRSNAENEQFHLTSYFNNQGYHTPAISIAMVANALLQLVT
NSSSSTLQVINHPLPRSTQDKINDEAMKDTIGFTIAFNIVFGMAFLASSFTLFLIKERST
KAKHLQFSSGVNSFTFWPATFCWDLINYLIPVVCLLITLRAFDIDAFVAGTNLAHIALLF
ILYGFATLPFMYLWSFLFTVPSTGYVWITMFNVLSGVATILAVGILSIPQLNLEDLSKTL
EWVFLLILPNYCLGQGLSDYYKNYELKDIHEEFCVKKGYDNLCTFVPNPCCRDITGDCGT
AECLDYNSNPLGWEASGIGRMLVFLCIQTVVYFFILFLVESEVAHSFLQRLTKKSQKHEA
YKMMSTTDESFIQEDEDVARERARLLNTDWQTLFNTEKLVLSQLTKYYGSNLVVNRISVG
IPQGECFGLLGVNGAGKTTTFKMLTGDETVSSGNAYLDGHSVISQIAEVRQKLGYCPQFD
ALIDQMTGRETLQMYARLRGIHKHQIKDVVNDLLDALLLMEHADKLVQAYSGGNKRKLST
AIALVGNPPVIFLDEPTTGMDPVARRFLWDTLCSIRQSGRTLILTSHSMEECEALCTRLA
VMVNGQFRCLGSPQHLKSRFGEGYFLIARVGVAPNEQIPNPQPLMTFIEQTFPGCVLIDL
HQGYINYHLTDSNLKLAEIFGIMENAKGDFLIEDYSVSQTTLEQVFLNFARAQTPPNEPD
PGCCGGLCFTCGVFSSCCRSKDRSMPLDYDESVSINSGNGQPSSGDLVVTV
NT seq
5376 nt
NT seq
+upstream
nt +downstream
nt
atgggtagaaaagggcagcattttttactactactatggaagaactttcttatcctgaaa
cgtaaaccattcataacatttcttgagattggaattccgacattcttcacgttaattctt
atcttcatacgtatgagggtaaagggagaaatgaaggagaatataggatggccagaatgt
gcagattgggatacaatttccacgaagtcagacttgcctcgaaatcttgcttttacaccg
gataacaacgttacaagaagaattttggaacgagcatcagatacccttaattttaaaggt
ataaaaggatttgactctgaagaagaaatgaagaattttctaatgttttcaaactctaca
aacaataacacttacaaattcctggcaggggttgtattcactaaccatttccatgacgat
ttgctcccagataaaatagcatacaaattaagatttagttcatcccctcgaaatgcaggc
aaagaagataataagctgtttcgaaaagacacacgttggcaaacagaatttacatttcca
atatttcagagagtcggtccaagagaaccttatgatatatgtggtggtgatccaggatat
gtgagagaaggtttcctagctgtacaacatgctgtaaattttgcagtgttgagggaagtg
ggtggggtaaaccagactgatattttagatagtgtcaatgttcatctgaaacgtcatcca
tatccagcatttaatgatgataattttatactggttatacaacaacagtttccaattatt
cttatgttgagttttgttattgtttctctcgttgttgtgaaggaaatagtacatgagaag
gagagaaaactgaaggaatcaatgaagatgatgggtgtagataattggttacattgggca
gcatggtttgtcaagaacttcctgtttttgctggttaccgtggcaattatgacactattt
ctgtgtatagacacaaacaagggaccagtgatagggaaaactgatccatccatattgttt
atatttataatgatctatgcgatatcaactatagctttctgttttgctaacagcgtattc
tttaagaaagctaactctggtgctgctggcggaggtatttttttctttgtgacctacatt
ccttatttcttcatacaaccgagatatgaaactatgacctggactcagaagatacttaca
tgtctactacctaacacagctatggcatacgggggtcaaatcattgggatgtatgaggga
acaggttctggtgtacagtggtctaatataatggacagtgtaagcgtggatgatgacttt
accttgtttcatgttctgatcatgctcatcatagatatatttctatgtggtataatcaca
tggtatgtggaagcagtgtttcccggagaatttggtataccacagaaatggtactttttt
gtaactagtgcatactggtttggcacagtaccagatgactttgtaccagaagacaagaat
atctccttaggtcaggcaccagaattttttgaagctgatccggttggtatcagggctggt
attcaaattaggagtttaagaaaggagttcaaagcaagagacacaaagaaggtagcagta
tgtggaatgactttagacatgtatgaggggcagattactgcattacttggtcataatgga
gcaggaaaaacaacaaccatgtccatgcttacaggatttatgcccccgtcaagtggaaca
gcaagggttaatggttatgatatacgtaaagatatccgcagtgtaagaagtagtttagga
ctgtgtccccaacatgatgtcttgtttgatacactaacagtagaagaacatcttatattc
tttggaaaattgaaaggatgtagctcagcaacaattaaagcagaaataaataacatgtta
gcatctgtagatctagaaaacaaaagacatagtcaagctaagacgctgtctggcggaatg
aaacgtaaactctctgttggaatagccctcattggaggctcaaaggttgtaattctggat
gaaccgtcttcgggtatggaccctgatgctagacgtcacatttggtccgtactgcagaag
aatcgcgcggggcgtacgatgctgttgactacacacttcatggatgaggcagaccttctt
ggtgacaggatagcaattatggcagacggggcagtcaaatgctgcggaacatctttgttc
ttgaagaacaaatatggagctggttatcatttgacgatggtgaaagatgaaaactgtaac
atagatggtgtttcttcgttaataaatacacacattccggaggcgaaacttgacagtaat
gtaggggcagaattgtcttatattttacctcatgagatgtcacataaatttgccacattg
tttacagagctagacaataaaaaggatgatctgggtgtgaccagctacaatgtctccact
accaccatggaggaggtgttcctgagagttggagaaacaagtgttggcattaaggaggca
aagcaagggaaacaaagtgtcaggaaaggtaaaggtagaatacctttaaattctaatgga
aaaaacacagatgaacagacacccctgttgaaaggtggagcagagaaccatacaagttat
tctggagagacacgttaccatagaagtgccagttttacacacaatatagataaaaacaca
aaccttgtcctctatcttcaacaattctatgcaatgttcatcaagcgtgttcttcataca
ttcagaaatcagcgtgttacagtatcacagttgagcgtgcctttattcttcacaataact
gctttgattgtaattaaaactttccctggacctcaggactcaccagctcttaatctaacc
attgattctttaggagataatgttgttgttttctctaaaatagccaatgcatcaatagaa
aattcattcatcaagttctataaagaacagtttaagcatgacttacaaactgaaacaatt
tatgttaacaatcagtcaggatttatgaaagatgcaaacatttctgattacttacttaaa
gtaggtcatgatgacataggagcatataacttaaagtatcttgtcggagcaagcattgag
cctcggagtaatgcagaaaatgaacaattccatttgacctcatactttaataatcagggt
tatcatactccagctatatctatcgcaatggtagctaacgctcttctgcagcttgtgacc
aacagttcgtccagtactctacaagtcatcaaccatcctttacctagatctacccaagat
aaaattaacgatgaagccatgaaagatactatcggatttacaattgccttcaacattgtg
tttggaatggcatttctagccagcagttttacgctgtttcttatcaaagaacgttcaact
aaagccaaacatttgcagttcagtagtggcgttaattcgtttacattctggccagcaaca
ttttgttgggatttgataaactatcttatacctgttgtttgtttactaatcaccttgcgg
gcatttgatatagatgcgtttgtagcagggacaaatctagctcatatagcactgctgttt
atcctgtatggatttgcgacgctgccattcatgtacctgtggtcatttttgtttactgtt
ccatcaactggatatgtctggatcacaatgttcaatgttttgtcaggtgtagccacaatt
cttgctgttggtatattgagtataccacaacttaaccttgaagatttatcaaagaccttg
gaatgggtgtttctgttaatcctgccaaactactgtctaggacaaggcctatctgactat
tacaagaactatgagttaaaagatattcatgaagagttctgtgttaaaaaaggatacgat
aatttatgcacctttgttccaaacccatgttgtagagatataacaggagactgtggtaca
gcagagtgcctggactacaattctaaccctcttggctgggaggcaagtggtataggcaga
atgttagtattcctttgtatccagacagttgtctatttctttatcttatttcttgtggag
tcagaggtggcacattcatttctacaacgtctgacgaaaaaatcacaaaagcatgaagcc
tacaagatgatgtcaacaacagacgagtcgttcattcaggaagacgaggatgtggccaga
gaacgggcaagactgctcaatacagactggcagaccctgtttaatacagaaaaactggtt
ttatcgcaactaaccaaatactatggctctaatttagtggttaacaggatcagcgtaggt
ataccacagggtgagtgcttcggtctgctaggtgtaaatggagcagggaaaacaacaaca
tttaaaatgctgacaggtgatgagacagtgtcatcaggaaatgcatatcttgatggacac
agtgttatatctcagattgcagaggtgagacagaagcttggatattgtccgcagtttgat
gctcttattgatcaaatgacgggacgcgagacattacagatgtacgcacgtctacgtgga
atacacaaacaccagataaaagatgttgtcaatgatttactagatgccttgttacttatg
gaacatgctgataaacttgtccaggcttacagtgggggtaataaacgaaaattgagcaca
gctatagctcttgtaggtaatccaccagttatattcctagacgaaccaacaaccggaatg
gatccggttgctagacgatttctttgggacacactttgcagtatacgtcaatctggaaga
actctgatcctgacctcacatagcatggaggagtgtgaagctttatgtacacgtctagct
gtgatggtgaatggacagttccggtgtcttggcagcccacagcatttaaagagccggttt
ggcgaaggatacttcctcatagctagagtaggagtagcaccgaatgaacaaataccgaac
cctcaacctttgatgaccttcattgagcagacgttcccaggctgtgtacttattgacctt
catcaaggttatatcaattatcacctgactgattcaaatctaaaattagcagaaatattt
ggcataatggaaaatgcaaaaggagactttttgatagaagattattctgtgagtcagacg
actctagaacaggtgttcttaaattttgcacgcgctcagacgcctccaaatgaaccagat
cctggatgttgtggagggttgtgttttacatgtggagtgttcagtagttgttgtagaagc
aaggacaggtcaatgccgttagattatgatgaaagtgtcagcattaactctggaaatggg
caaccatcttctggtgatttagtagtaactgtatga
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integrated database retrieval system
