Ruditapes philippinarum (Manila clam): 132759596
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Entry
132759596 CDS
T09557
Name
(RefSeq) ras-related protein Rab-39B-like
KO
K07925
Ras-related protein Rab-39B
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132759596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132759596
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
rphi04031
]
132759596
Membrane trafficking [BR:
rphi04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
132759596
GTP-binding proteins [BR:
rphi04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
132759596
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
RsgA_GTPase
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
132759596
NCBI-ProteinID:
XP_060607393
LinkDB
All DBs
Position
Unknown
AA seq
215 aa
AA seq
DB search
MVEPIFDFQFRLILIGDSTVGKSSLLKYFTDGKFSELCDPTVGVDFFARLIEVKNGIRVK
LQLWDTAGQERFRSITRSYYRNSVGVLIVFDITKRQSFENITGWLAEAKFHIEPHQAVYM
IVGHKSDCESERQVSSREASQFAQLNGLKYIETSAKNGHNVEETFQTLAKDVYKLLEEGR
VKMQEGWDGIKPGFNRGEETVHHLDEEETEKNKCC
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggttgaaccaatatttgactttcaatttagactcattcttataggagacagcactgta
gggaaatcttctttattgaaatattttacagatgggaaattctcagaactctgtgatcca
acagttggtgtcgatttctttgcaagacttatagaagtaaagaatgggattagagtcaaa
ttacaactatgggatacagctggtcaggagagatttaggtcaataacaagatcatattac
aggaactctgtaggagtgttaattgtgtttgacattacaaagagacaaagctttgagaat
ataacaggatggttagccgaggcgaaatttcacatagaaccacaccaagctgtttatatg
attgttggacataagtcagattgtgaatctgagagacaagtgtcttctagagaagcctca
caatttgcacaactaaatggactgaaatatatagaaacgtcagcaaagaatggtcataat
gtggaggaaacattccagactttggcaaaggatgtgtacaagctactggaagagggcagg
gttaaaatgcaagaaggatgggatggtataaaaccaggttttaatcgaggagaagaaact
gttcatcaccttgatgaggaagagacggagaaaaataaatgctgttga
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