Ruditapes philippinarum (Manila clam): 132759706
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Entry
132759706 CDS
T09557
Name
(RefSeq) syntaxin-5-like
KO
K08490
syntaxin 5
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
132759706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132759706
Membrane trafficking [BR:
rphi04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
132759706
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
FlaX
DUF2207_C
Vac_Fusion
DUF16
Syntaxin
Motif
Other DBs
NCBI-GeneID:
132759706
NCBI-ProteinID:
XP_060607506
LinkDB
All DBs
Position
Unknown
AA seq
355 aa
AA seq
DB search
MITRRRRNNSDSDDQPNPYRYHKTGQTIETQIPTVSDFHSSSLDLEMSCRDRTIEFASAV
KSIKSRQINGHLPTSRNTGAIKQRSEFTQIAKRIGRDLANTFAKLEKLTLLAKRKSLFDD
KPVEIQELTYIIKEDINSLNKQIAQLQQVARGQQGQNGRQKQSHSNTVVVALQSKLASMS
NDFKQVLEVRTENLKHQKSRREQFSQSASSSPATPQGFGNPGQSVLLQDEAKHNGHAGGD
FAINMDMDRSRYQQQLQLIDEQDSYISERASTMQNIESTIVELGQIFTQLAHMVKEQDEA
VQRIDSNVEDAQLNVEAAHGEILKYFQSVTNNRWLMIKIFAVLIIFFIIFIVFMA
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccaggcgaaggagaaacaattcagactcagatgatcagccaaacccttacaga
taccataaaactggacaaacaatagaaacacaaataccaactgtctcagactttcatagt
tcatctttagatttagaaatgtcatgcagagaccgcactattgagtttgcttctgcagta
aaatcgattaagtcacgacaaatcaatggacatttacccacttcgaggaatacaggggcc
ataaagcagagaagtgaatttacacaaattgcaaagagaattggaagagatcttgccaac
acatttgccaaactcgaaaagttaacattattggcaaagaggaaatcattatttgatgac
aaaccagtggagatacaagagttgacatatatcataaaggaagatataaacagtttaaac
aaacagatagcacagttacagcaggttgctcgaggtcagcaaggtcaaaatggacgacaa
aaacaaagtcattcaaatacagtggttgtggcacttcagtcaaagttggcatcaatgtca
aatgacttcaagcaggtccttgaagtcagaacagagaacttgaagcatcagaaatctcgt
agagaacaattttcacaatcagcgtcatcatcaccagcaacacctcagggctttggaaac
ccaggtcagtctgtattgttacaagatgaagctaaacataatggccatgctggtggagat
tttgcaataaacatggacatggataggtccaggtatcaacaacagttacaactcatagat
gagcaggactcatacataagtgagagagcaagcacaatgcaaaatatagagtcaacgatc
gtagaacttggtcagatatttacacaacttgctcatatggtgaaagaacaagatgaagct
gtacaaaggatagattccaatgtagaggatgcacaactgaatgtggaagctgctcatggc
gaaattttaaaatactttcagtcagtgacgaacaatagatggctaatgataaaaatattt
gctgtgttgataatatttttcatcattttcatagtgtttatggcctaa
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