KEGG   Ruditapes philippinarum (Manila clam): 132759788
Entry
132759788         CDS       T09557                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC3-like isoform X1
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
rphi  Ruditapes philippinarum (Manila clam)
Pathway
rphi03020  RNA polymerase
rphi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    132759788
  09124 Replication and repair
   03420 Nucleotide excision repair
    132759788
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rphi03021]
    132759788
   03400 DNA repair and recombination proteins [BR:rphi03400]
    132759788
Transcription machinery [BR:rphi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     132759788
  RNA polymerase III system
   RNA polymerase III
     132759788
  RNA polymerase I system
   RNA polymerase I
     132759788
DNA repair and recombination proteins [BR:rphi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      132759788
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG
Other DBs
NCBI-GeneID: 132759788
NCBI-ProteinID: XP_060607623
LinkDB
Position
Unknown
AA seq 150 aa
MAGVLFEDIFDVKDIDPDGKKFDRVSRLFCESESFKMDLILDVNTQLYPMDLADKFRMVI
AVTLNEDGTPADNEFNPTDTGPSRADSFEYVMYGKVYRLEGDDGSGSDSCRLAAYVSYGG
LLMRLQGDANNLHGFEVDSHVYLLMKKLAF
NT seq 453 nt   +upstreamnt  +downstreamnt
atggcgggcgtgttatttgaggacatatttgatgtgaaagacatcgatcctgatggaaag
aaattcgacagagtttcgaggctgttttgtgagagcgagtcgtttaagatggacctcatt
ctggacgtgaacactcagctttatccgatggacctcgcggacaagttccgaatggtaata
gctgttacactgaacgaagatggtactccagctgataatgagtttaaccccacagacaca
ggtccgtcacgtgctgatagcttcgagtatgtgatgtacggaaaagtgtaccgtcttgaa
ggcgatgatggatccgggtcagactcgtgtagactggcggcctatgtgtcttatggtggt
ttattgatgagattacagggggatgccaacaacttgcatggttttgaggttgactcgcac
gtgtacctgctgatgaagaaattggcgttttga

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