Ruditapes philippinarum (Manila clam): 132759856
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Entry
132759856 CDS
T09557
Name
(RefSeq) transcription termination factor 2-like
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rphi03021
]
132759856
Transcription machinery [BR:
rphi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
132759856
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
132759856
NCBI-ProteinID:
XP_060607698
LinkDB
All DBs
Position
Unknown
AA seq
1197 aa
AA seq
DB search
MDSERRTKVPEQLIRSKNHQPLKDLNYMQSSNSRYNTSNKDFKSTMESEKPKQKLTLKEY
RERSKSKSPGKPEDDLSKAIEKGLESRGDKQVSEIAMLANASIRDERAMSIDEVADVSID
LANMSIDQTDFFLDEKSGELVGNKKEKEIGVVEEQGSQKPTNKLKLKKSVSLTKATENDV
RKMRSEKSDSSLTLKAENKSNAPHVNDNNGKFDLSLSERVRIKSGGPQTVTEKDIKSGIS
EKINQPGTIKPVSKEKVVTGSPEIIDLTSDEESPVPVKSATHGLVHTETKNQDKKKPDNV
GEMFGMGMKQQLQSFQALNKQPAPDVISVPQNSQQWTQARDSAQSHGFKPGTAQLEQQVK
ADIARRNELSRLLEKQKTIIATVNMSQLPDRGEKLRENVNSITRNIADLTIKIKQNVEIL
NRKQTEQQSTSRQQIAHTQGVSQPKVIMIRPDGTVIKQEQVSHSQPSSQPQVIKIFPNGS
SVVQQQGNYQAHNPDNLKQTSLLPHVAQIPPHILQQMYAANPQAMQLYGGRMTAARLREV
GSVTKEAIERLHKQLETCPKSTEELEDPRGVVVPLMTHQRQALMWLVWRERQTPSGGILA
DDMGLGKTLTMISLIIKQKELRKGGSEEDKQVWLNRDKQLEKLGKSVVKSNATLVICPAS
LIHQWRTEIERRCKPGLLRVCLYHGPNRESNVLKLASYDVVLTTYNIIAKEVEVDDNDKN
GEQPVKDDTDDKPEGEENKLDEDKTRKLMPNVMRIAWERIILDEGHNIKNHKSLQSRAVC
RLRAGFRWALTGTPIQNDLLDMYSLLRFLRCSPFDEYKVWKRQVDTGSSTGQNRLNVLVK
SLLLRRTKAQTCAEGKPLVPLPEKMSTIHELELSEQERQVYDKVFAQSRSVLKEYLKRHE
DKEMLKDDYVSPKSSNPFMDKKSPSSLVPGSSTSGTQSVVGETSTGVKPTAQHILVMLLR
LRQCCCHLSLMKDAVDEETQENEGLEMTLEEQMMDLMLNDDTDKQPTVKKSSQLFEKEAL
STKMQALMNELKEIHRPTKSKDKCKSVVVSQWTKMLDIVAVHLQKLKIRCSVIQGNIPAK
KRMEAVDRFNNDADGPEVMLVSLRAGGCGLNLIGGNHLFLLDSHWNPALEDQACDRIYRV
GQKKNVYIHRFLCKETVEEKIQQLQKRKTDLAKSVLTGGAMNKNKLTLADLRMLFGV
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atggattcagaaagaagaactaaagtaccagaacagctgataaggtcaaagaatcatcag
ccgttgaaagatttaaattatatgcagtcatctaactctagatataatactagcaacaaa
gatttcaaatcaacaatggaatcagaaaaaccaaaacagaaacttacgctaaaagaatat
cgtgaacgttccaagtctaaaagccctgggaaaccagaggatgatcttagtaaagcaatt
gaaaagggactagagagtagaggtgataaacaagtatctgagattgctatgttagctaat
gctagtattagagatgagagggcaatgagtatagatgaggtagctgatgttagtatagac
ctggctaatatgagtattgatcagacagatttctttcttgatgaaaaatctggagagctt
gttggtaataaaaaagaaaaagaaattggagttgttgaagaacaaggctctcaaaagcca
accaataaattaaagttgaaaaaatctgtaagtttgaccaaagctactgaaaatgatgtt
agaaagatgagatctgaaaaatctgacagttctttaacattgaaagctgaaaataaatca
aatgctccacatgttaatgacaataatggaaaatttgatttatcattgtcagagcgagta
agaataaagtctggtggtcctcaaactgtgacagagaaagatataaaatctggtatatct
gaaaaaattaaccagcctggtactataaaaccagtaagtaaggagaaagttgtgactggt
tccccagaaattattgatcttacctctgacgaggaaagtccagtaccagtcaaatctgca
actcatggcttagtacatacagaaacaaagaatcaagacaaaaagaaaccagataatgtt
ggtgaaatgtttggtatgggaatgaagcagcagctacaatcatttcaagctcttaacaaa
caaccggcaccagatgttatatctgtaccacagaactcccagcagtggactcaggcaaga
gattcagctcaatcacatggcttcaagccaggaactgcacagttagaacaacaagttaaa
gctgatattgcaagaaggaatgaactgtccagacttctagaaaaacaaaagactataata
gctacagtgaatatgtcccagttaccagacagaggagaaaaattacgtgaaaatgtaaac
agcataacgaggaatattgcagatttgacaataaagatcaaacagaatgtagagatatta
aacagaaagcagactgaacaacagagtacaagtcggcaacaaattgcccacacacagggt
gtatctcaaccaaaagttatcatgatccgtccagatggtactgtaattaaacaagagcag
gtgagtcattcccaaccatcaagccagcctcaagtgatcaaaatatttcccaatggttca
tcagttgttcaacaacaaggaaactaccaagcacacaatcctgacaacctgaaacagaca
agtttgttaccacatgtagctcaaataccacctcatattttacaacagatgtatgcagct
aatccccaggcaatgcagttatatgggggtaggatgacagcagctaggttgagagaagtt
ggcagtgtaacaaaggaagctattgaaagattgcacaaacagttggagacttgtcctaaa
tcaacagaagagttagaagatcctcgaggtgtagttgtaccattaatgactcaccagaga
caggcattgatgtggttagtgtggagagaaagacaaactccctctggtggtatacttgct
gatgatatgggtctaggtaaaacactgactatgatttcactgataataaaacagaaggag
ttacggaaaggtggtagtgaggaagataaacaagtgtggttgaatagagataaacagctg
gaaaaattgggtaaatcagttgtgaaatcgaatgcaactcttgtgatatgtccagcatca
ttaatacatcaatggaggacagaaatagagagacgatgtaagccaggtcttctacgcgtc
tgtctctaccatggtcctaacagggaatctaatgtactcaagttggcaagttatgatgta
gtgttaacaacatacaatataatagctaaagaagtggaggtagatgacaatgataaaaat
ggtgaacagcctgtaaaagatgatactgacgataagcctgagggagaggaaaacaaactt
gatgaagataagactaggaagttaatgcctaatgtaatgaggatagcctgggagagaatt
attttagacgagggacataacatcaaaaatcataaaagtttacagtcacgtgctgtatgt
agactgagagcaggcttcagatgggctctaacaggaacacctatacagaatgatctgcta
gatatgtactcgttactgaggtttttaagatgttcaccatttgatgaatataaagtctgg
aaacgtcaagtagacaccggaagttctacaggacagaacagactgaatgtactggtgaaa
agtttattactgagaaggacaaaagctcaaacttgtgccgagggtaaaccactggttccc
ttaccagagaagatgtctacaatacatgaactagaattatccgagcaggagagacaagta
tatgataaagtgtttgcacagtcaaggtctgttttgaaggaatatttaaagagacatgaa
gataaggaaatgttaaaggatgattatgtctcaccaaaatcttcaaatccttttatggat
aagaaatctccatctagcctggtacctggttctagtacgtcaggaacccagtcagttgtt
ggggaaaccagtactggtgtcaagccaacagcacagcatattctagtcatgttgctacgg
ttacgacagtgttgttgtcatcttagtcttatgaaagatgctgtagatgaagagacacag
gagaatgagggactagagatgacattagaggaacaaatgatggacctaatgctgaatgat
gatacagacaaacaaccaactgtgaaaaaatcatcacaattatttgaaaaagaggcactc
agtactaagatgcaggcattgatgaacgagctgaaggaaattcacagaccaacaaagtca
aaagataaatgtaaaagtgtggtggtatcacaatggacaaagatgttggatattgtagct
gttcatctacagaaactaaagatacgatgttcagttatacaaggtaatataccagccaag
aaaagaatggaggctgtagatcggttcaacaatgatgcggacggtcccgaggtgatgctc
gtgtcgctacgtgctggagggtgtggtcttaacctgattggtggaaatcatctctttctg
ttagatagtcactggaacccggctctggaggaccaggcctgtgacagaatctatcgagta
ggacaaaagaaaaatgtctacattcacagatttttatgtaaagaaactgtggaagaaaag
atacagcaattacagaaaaggaaaacagatttagctaaaagtgttcttactgggggagca
atgaacaagaacaaacttacattagcagatctgaggatgttatttggagtttga
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