KEGG   Ruditapes philippinarum (Manila clam): 132760073
Entry
132760073         CDS       T09557                                 
Name
(RefSeq) lysine-specific demethylase 5A-like isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
rphi  Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rphi01009]
    132760073
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rphi03036]
    132760073
Enzymes [BR:rphi01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     132760073
Protein phosphatases and associated proteins [BR:rphi01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     132760073
Chromosome and associated proteins [BR:rphi03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    132760073
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_5 zf-HC5HC2H PHD_2 PCP_red
Other DBs
NCBI-GeneID: 132760073
NCBI-ProteinID: XP_060607947
LinkDB
Position
Unknown
AA seq 1801 aa
MSLPEDPYVNFEPPPEAPVFTPTEEEFADSLAYIAKIKPIAEKYGICKVKPPKDWQPPFA
VDVDKFRFVPRVQRLNELEAKSRIKLNFLDQLAKFWELQGSSLKIPHVERKLLDLYDLYK
TVEKEGGMESISQERRWTRVATSMGYESGKGVGGTLKCHYERLLFPYYLFKTGASLEAAN
LKIIDDKEDNSADADYKPHGIEERIASGSYKRIPKMERKDVKQEPAIDFNKNPELRKLQF
LGAGPKTAIPKVGEEEEEKPEVKEGKKMKTRNKTNPGLYTYVDLYYCHTCGRGDGEEYML
LCDGCDDAFHTYCLIPPLSEIPKGDWRCPKCIQQACSKPQDPYGFEQSKREFSLQSFGEM
ADNFKSNYFNMPVHMVPCEMVEKEFWRLVNSLEEDVAVQYGADVHAMDQGSGFPTKAVKE
QFMEDEVTDCVTEEYMNSSWNLNNLPVQEASVLCHINADISGMKVPWCYVGMCFSSFCWH
IEDHWSYSINYMHWGEPKTWYGVSGHNADQFEDAMKRTAPELFENSPDLLHQLTTIMNPN
VLMKQGVKICRTNQHAGEFVITFPRAYHAGFNQGYNFAEAVNFCPSDWLPMGRKCIEHYR
DLHRQCVFSHEELICKMAADPDNLDFKVAASTHEDLLGIADIEKQLRKNLLQMGVTEAER
EAFELLPDDERQCSFCKTTCFLSALTCVCSERIVCLRHADKLCSCPPSKYCLRYRYTLDE
IPAMLSRLKERAECYEIWHKSVEKALEATDDNKVDLLELKNLLIDAEEKHFPDSELMQSL
NNAVTEAMKCANVANQLVSKKVRTRNRQNTDGKYIAKLSLEELNCFYEQVASLPCIIKEG
KLLKELLDQVLNFQAEAKEALEAETPDSVKLEQLIDFSVQLDVDLPEIPKLKQVLQQAKW
LDEVRESLQDPESVVLDTLRKLMESGVGLSPHNAVEKAMAELQELLTLSERWEEKARICL
QARPRHVMSTLEAIVNEATNIPVCLPNVNALKEALRKAKDWTSKVEAIQSSESYPYLDVV
ESLVNKGRPIPVRLDQLPQVESQVAAAKSWRERTARTFLKKNSTYSLLEVLSPRSDIGIY
SSGKRKKRLKDLERVHSDNSMSDIKIEEQRDPALIVAAFKMAEEKEAEAMMDLRIRNMEK
IRQDGVDARFCICRKGASGFMLQCELCKDWFHGTCVPLPKSANIKNRSSQMAAVQAAKDL
KFLCPLCLRSRRPRLETILSLLVSLQKLPVRLPEGEALQCLTERAMAWQDRARQALTTSE
LASALAKLSVLSQKMVEQAAREKTEKIINAELMKAANNPELQGHLASVTQNAFSGNGNVP
PRVTDSGIGMDLESSLPMPLSPPVVNEDSQGGEEDYQLEIEVVSSGENSNSNPPPGGMSE
HAYSSMSKLNPGAMSPKKQQRKTPLIPRQLENPVLELSDQAKVQLEILMMEGDLLEVSLD
ETQHIWRILQACQPRSEDNRVVEFDDYDSTKIGYDGERIKIKKEKDPEKRKYKKRKSLEG
GDPLKPKKVKVITVGLDGEKLKKKKLKVMKPKIKREFDENGMEFQDIMTEELTGPLTIDI
KPDKLKKLKAKIEKGEKPRKKKKLKVQQLKSEDGQPLEKKKRKKRVKKELMMADDDDSDE
DCAARKCLKPTGEVNWVQCDRCEEWFHLLCVGLAEDEVSEEEEYECFSCKQGRGQQPVLV
SNHGKQSTVSPSKVPGMFNYSGMSVIKGEQDMDNVLVCNEEVEVSMDTSQSSSYNRAIET
YHSALIAEKEEQEMATSSKITQFSYETDESSQDEMKSSFSVSADSNEAVAMATQISVTGD
A
NT seq 5406 nt   +upstreamnt  +downstreamnt
atgagtcttcccgaggatccgtatgtcaacttcgaaccacctccagaggcaccggttttt
acaccgacagaagaagaatttgcagattcacttgcgtatatcgcgaaaataaaaccaatc
gccgaaaaatatggaatttgcaaagttaaaccaccaaaggactggcaaccaccttttgca
gtcgatgttgacaaattcagatttgtaccacgtgtccaacgtcttaatgaactagaggca
aagtctcgtatcaagttgaacttcttggatcagttagctaagttttgggagctacaggga
agtagcttgaagattcctcatgttgaacgtaaactgttggatctctatgacctttataag
actgtcgagaaggaaggtggtatggaatcaatctcacaagagagacgatggaccagggta
gccacgtctatggggtacgagtctgggaaaggcgttggtggaactcttaaatgccattat
gagagattacttttcccatattaccttttcaaaactggggcatcacttgaggctgctaac
ttgaagataattgatgacaaggaagacaattcagccgatgctgattataaaccacatggt
attgaggagagaattgccagcggtagttataaacgtatacccaagatggagagaaaagat
gtcaaacaggaaccagcaatagacttcaataagaatccagagttaaggaagttacagttc
cttggagccgggcccaaaactgcaataccaaaagtaggcgaagaggaagaagaaaaacca
gaagtaaaagaaggaaagaaaatgaaaaccagaaacaaaacaaacccagggctttacact
tatgttgacctatattattgccacacatgtgggcgtggtgatggggaggagtatatgttg
ctatgcgacggttgtgatgatgcgttccacacctattgtttgatacctcctctatctgag
atacctaaaggggactggagatgtcctaaatgtatacaacaggcatgcagtaaaccacag
gatccatatggttttgagcaatccaagcgagagttttccctacagtcgttcggagagatg
gcagataactttaaaagtaattacttcaacatgcctgtacatatggtgccatgcgagatg
gtagagaaggagttttggcggttggtgaacagcctagaagaggatgtggctgtgcagtat
ggggcagatgttcacgccatggaccaggggagtggctttccaacaaaagctgtgaaagaa
cagtttatggaagatgaggtaaccgactgtgttacagaggaatatatgaactctagttgg
aacttgaacaacctcccagtacaagaagcctcagtattgtgccatattaatgctgatata
tctggcatgaaggtaccatggtgttatgttggaatgtgtttctccagtttctgctggcat
attgaagaccactggagttactccatcaattacatgcattggggtgaaccaaagacctgg
tatggtgtatcaggccataatgcagaccagtttgaagatgctatgaaacgcacagcacca
gagctgtttgagaactcccctgatcttctgcatcaattaaccacaattatgaaccctaat
gtgcttatgaaacaaggagtaaagatttgtcgaaccaatcagcatgcaggagagtttgtt
ataacattcccaagagcatatcatgccggctttaaccagggatataactttgctgaagct
gtcaacttctgtccatcagactggttaccaatgggaagaaagtgtatcgagcactacaga
gatttacacagacagtgtgtattctcacatgaagaactcatatgtaaaatggccgccgac
cctgacaaccttgactttaaagtcgcggcaagtacacatgaagatttactcggtatagca
gatatagagaaacaactgaggaaaaacttgttacagatgggtgtgacagaagctgagaga
gaagcgtttgaattgttaccagatgatgagagacagtgtagcttttgtaaaaccacatgt
ttcctgtcagctcttacctgtgtatgttctgaacgtattgtttgtctccgtcatgcagat
aaattatgtagttgtccacccagcaagtattgtttaaggtatcgttatacccttgatgaa
atcccagcaatgttgagcagattgaaggagagagcagagtgttacgagatatggcataaa
agtgtggaaaaagccttggaggctactgatgataataaagttgatttactggagttgaag
aacttactaatagatgcggaggagaaacatttcccagattctgaactcatgcaatccttg
aataatgcagtaactgaagctatgaagtgtgccaatgttgccaatcaacttgtgtcaaag
aaagttagaactaggaatcgacagaatacagatggtaaatacattgctaagctaagccta
gaagaacttaattgtttctatgaacaagtggccagccttccctgtatcattaaagaggga
aaattactcaaggaattactggatcaggttttgaactttcaagcagaggccaaggaagct
ttggaagcagagacacccgactctgtcaagctggaacagttaatagacttcagtgtacag
ttggacgttgatctacctgaaataccaaaacttaaacaggtattacagcaagctaaatgg
ttagatgaagtgagagaatccctgcaggatccagaatctgttgttttggatacattaagg
aaacttatggagtcaggagttggtctgtcaccacataatgctgtagagaaggctatggct
gagctgcaagaactgttaacattgagtgagagatgggaagaaaaagccaggatttgtttg
caggccaggccgagacatgtaatgtcaacattagaagcaatagttaacgaggctaccaac
attcctgtctgcctacccaacgtaaatgctctcaaggaagctttacgtaaagccaaggat
tggacctccaaagtggaggccatacaaagttctgagtcctatccttacctcgatgttgtt
gagagcttggtgaataaaggtcggccaattccggtacgcctagatcaactcccgcaggta
gagtcgcaggtggctgcagctaagtcttggagagagcgtacagcaagaacattcctaaag
aaaaactcaacatacagtctcttagaggtattgtcacctcggagtgatataggtatatac
agcagtggtaaaaggaagaagaggttgaaggatctagagagggttcactcggacaacagt
atgagtgacataaagattgaagaacagagagatcctgctcttattgttgcggcgtttaag
atggcggaggagaaggaagcagaggctatgatggatctacgtatacgtaacatggagaag
atacgacaagacggggtagatgccaggttctgtatctgtaggaaaggtgcctcgggattc
atgttacaatgtgaactatgtaaagactggttccatggtacctgtgtcccattgcctaag
tcagcaaacatcaaaaacagatcttctcagatggctgcagtacaggcagcgaaagatctc
aagttcctctgtccactgtgcttacgttctcgtaggcctcgtttagaaaccattctatct
ctacttgtgtccttacaaaagttaccagtccgtttacccgagggagaagcattgcagtgt
ttgaccgaacgtgcgatggcatggcaggatagggcacgtcaagcattgacgacgtcagaa
cttgcctcagcccttgcaaaattgagtgtacttagtcagaaaatggttgagcaagcagct
agagaaaaaactgagaaaataataaacgctgaacttatgaaagctgctaataatccagaa
ctgcaaggtcatttagccagtgttacacaaaatgctttcagtggaaacggaaatgtacca
cctcgagtgacagattctggaattgggatggatttggagagctcgttaccaatgcctctg
tccccaccagtggtgaatgaggactctcagggtggggaggaagattatcagctggagatt
gaagtggtcagttcgggagagaacagcaatagtaaccctccacctggaggaatgtcggag
catgcatactcgtccatgtccaaacttaaccctggggctatgtcaccaaaaaaacagcag
cgtaagacaccattgataccacgtcagttagagaaccccgtactagagttatctgatcag
gctaaagtccagctagagattctaatgatggagggcgatcttctagaggtgtcactagac
gagactcaacatatctggcgtattcttcaggcctgccagccacgatcagaggataacaga
gttgtagaatttgatgactatgattctacaaagattggttatgacggtgagagaatcaag
ataaagaaggaaaaggaccctgaaaagaggaagtacaaaaagaggaagagtcttgaaggt
ggagacccacttaaacctaagaaggtcaaggtcattacagttggattggatggcgaaaaa
ttgaagaaaaagaaacttaaggttatgaagccaaagataaagagggagtttgatgaaaat
ggaatggaattccaagacataatgacagaagaattgactggaccactaaccattgacatt
aaaccagataaactgaagaaacttaaggcaaagatagagaaaggggagaaacccaggaag
aagaagaaactaaaagtacagcagttgaaaagtgaagatggacaaccactagagaagaag
aaacgtaagaagagagtaaagaaggagttgatgatggctgatgatgatgatagtgatgaa
gattgtgctgctaggaagtgtcttaaacctactggagaagtaaattgggtgcagtgcgac
agatgcgaggaatggtttcacttgttgtgtgtcggtctagccgaggacgaggtgtcggag
gaagaggaatatgaatgtttctcatgtaaacaggggcgtggtcaacaacctgtccttgtc
agtaaccatggtaaacaaagtaccgtgtcaccatctaaagtcccaggaatgtttaactac
agtggaatgtctgtgattaaaggcgaacaagacatggacaatgtacttgtctgtaatgag
gaagttgaggtgtctatggatacgtcgcaatcatcaagttacaacagagcgattgagacc
tatcatagtgccctgatagcagaaaaagaggaacaggaaatggctacatcctctaaaatc
acacagttctcgtatgagaccgatgaaagttcacaggatgaaatgaaatcttcgttctct
gtcagtgctgactcaaatgaagctgttgccatggcaactcaaataagtgtcacaggggac
gcatag

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