Ruditapes philippinarum (Manila clam): 132760090
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Entry
132760090 CDS
T09557
Name
(RefSeq) 5-methylcytosine rRNA methyltransferase NSUN4-like
KO
K21970
5-methylcytosine rRNA methyltransferase NSUN4 [EC:2.1.1.-]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rphi03009
]
132760090
03029 Mitochondrial biogenesis [BR:
rphi03029
]
132760090
Ribosome biogenesis [BR:
rphi03009
]
Eukaryotic type
Other ribosome biogenesis factors
132760090
Mitochondrial biogenesis [BR:
rphi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
132760090
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
FtsJ
Motif
Other DBs
NCBI-GeneID:
132760090
NCBI-ProteinID:
XP_060607970
LinkDB
All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MLGNLSKVLWRFNDNTKVKRYFFRGFKMKHDQKKGPKKFTNSDRALEHFDLHYKPFYKDK
WPSIRISLLTAKKTCAVMNNFAENSKYIDDFKHKGAYDIVERAKARQLENVSEDNANVND
DCTSELENMPGNELSIGDKIAGKKIENSELRFEKTEESDTSLDNDRVQEVLNEPDEQFIE
LNKVADMKITGLDFDRTDLHNFMPVETVYSETVNLRIEEAKRSVYTPSDVKVDIVKPRMI
NLPEVLQVIGFPSGDITEFPDVKIDKPDGHLCYFMMDAASILPVIALDLEKGDNVLDLCA
APGGKSLTILQTELAGHLTCNDLSGSRVKRLLDILQFYIPEEERNNVTVTRKSGLTYNQP
DFDKVLVDVPCNTDRHYLLEDKNNLFSPSRINERIEMPTVQKDLLLAGIKSCRPGGCIVY
STCTLSPAQNDGVIQNTLDDLWRNTNIDVVVESLREKMTFFKILKNLLDFKKDN
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgctgggaaacttgtcaaaagttttgtggcgatttaatgataacaccaaagttaaaaga
tatttctttcgtggttttaaaatgaaacacgatcagaagaaaggtccgaaaaagttcacc
aattcagatagagcattggaacattttgatctacactataaaccattctacaaggataaa
tggccttctataagaatttcattgctaacagctaagaaaacatgtgcagttatgaataat
tttgcagaaaatagtaaatacattgatgattttaaacataaaggggcatatgatatagta
gagagggccaaggcaaggcagcttgaaaatgtgtcagaagacaatgctaatgtaaatgat
gattgtacttcagaactagaaaacatgcctggcaatgaattaagtataggagataaaatt
gccggaaagaaaattgagaatagtgagttaagatttgaaaaaacagaagagtctgataca
tcccttgataatgatagagttcaagaagtgttaaatgaaccagatgagcagtttattgaa
ttaaataaggttgctgatatgaaaattactggacttgattttgatagaactgatttgcat
aattttatgccagttgaaacagtgtattcagaaactgtaaatttaagaatcgaagaagct
aaaaggagtgtatataccccatctgatgttaaagttgacattgtaaaaccaagaatgata
aatttaccagaagttctacaggtgataggatttccaagtggtgatattacagagtttcca
gatgttaaaatagataaaccagatggtcacttatgttactttatgatggatgcagcctca
attcttcctgtaattgcccttgaccttgagaaaggtgacaatgttcttgacctttgtgca
gccccaggtggaaaatcattaacaattttacagactgaacttgcagggcatctaacatgt
aatgatttatccggatctagagtaaagagattactagatatattacagttttatatacca
gaggaagagaggaataatgtgacagtgacaagaaaatcaggtctaacttacaaccagcca
gattttgacaaggtgttagtagatgttccatgtaacacagatagacattacctgctagaa
gataagaacaatctattcagtcctagtcgtattaatgagagaatagaaatgccaactgta
caaaaggatctcctgctagctggtataaagtcatgtcgacctggcggctgcattgtttac
tccacctgcaccctaagccccgcccagaatgacggagttatacagaacacacttgatgac
ctctggagaaacacaaatattgatgtcgttgttgaaagtttaagggaaaaaatgaccttt
tttaaaattttaaaaaaccttttagatttcaaaaaggacaattaa
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