Ruditapes philippinarum (Manila clam): 132760117
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Entry
132760117 CDS
T09557
Name
(RefSeq) uncharacterized protein LOC132760117 isoform X1
KO
K28108
shortage in chiasmata 1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rphi03036
]
132760117
Chromosome and associated proteins [BR:
rphi03036
]
Eukaryotic type
Meiosis-specific proteins
Others
132760117
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHOC1_ATPase
SHOC1_PDDEXK
SHOC1_HhH_tandem
Bystin
Motif
Other DBs
NCBI-GeneID:
132760117
NCBI-ProteinID:
XP_060607997
LinkDB
All DBs
Position
Unknown
AA seq
1520 aa
AA seq
DB search
MKSELLSSVRGKYTTVILTEKERDVTSVVSKHVVRPEQICIPTIEKFDNPPVTKMNTSFL
EINEIIVTEHDRQCERALLDSPMVNGYSSNISYSESPLPLPGRHKLEMPSFDKCLISAEK
KEILIKKLWQSQKYCDEIQASRIPEPDLSNEVEDREHAIKQSKMILKVKSDTSTGTSDLK
LNWEISRYTEEITDSCKLIVPFCKDNIIDDEPLKDVEPIEKFSSRDLYDWKDEEIPLKDG
KDKKIGAAAEKQVRCLKPQKITGDVNQEPMSIQTFSDPLGNFMVLRSKKTAEKSVNQTKE
NSVCDTKLHEPEKNFGCDRNQVVGGAIKLKQNFESKKRAKHHVVKIKLSEDYQHILDILE
SASENCINVLKQAAEISQSCTFKTITPDISRYLLKQKEKSLADHDQENSSDELYKMTVIL
HGLVMASEITVNCCLESGIGCLSALQEKYKHVIGSNLDSTRQVLFELKAQFYEKKIYHPK
VVTLCREIETWLKKKRAKTKDSEQKILVLVQRDIPSLLSCLKKALNLGNLLSPCILSSSE
SEHIIDSLDKHNCVIAPTKMVCENFPWAQFSLVVEYENETSSQWQQLCERQHIRHIGLCI
QSDKHKDTTTLTLECPEEQICLIGSQKVVQSIELLQLLETRHNILLLVRDYSLIGGAKHL
FFSDIDVDASTGIVLEDIKDLNDDCAVQNLVTKMVALSLKYVNCWLILFANTKTGSYQYP
GHVINNIGRLQAAVANFVDKSSYFKARILFCEGCSEVSSIVRSISENCMALSKTKEQWLD
RTWLRDEIQQDERALLMLPCLSSFSSQLLLKKLPLGRIFKSSMVDLQRDVSEIPSSILQT
LDEFVRSNTGLHLQVDTLEDQLYDQCDNTTSLANNVVDGVENSDSQIKESLSQDQNENDE
VSRDMYVSEDFQRKGRTTRYYSHQQLHTAMKNIPALPNEEKEIDAMLCAENKQSNETDKN
NKICIDDQSKHRIRYNYSSAGRTEDSKENNFDSDAKFRKIKNTKENIHRSANDRVEWEHL
DNFISSNTNVNRLTTCNNVTNEIKSDKHEYEISKMQNERYLNPVEKLTAMKESDRLKKSE
SDEKYHKYMHTGKDNNNESRYFVGEAMSINNSKYLSSYSAANYPRNHSDSTEHIPLENKR
NEMLANGIKTRKAISQEMKQNLYKSNVSYPVQPKQISSWSSNSTQTFDYNHGLPFNVESL
AVNEGESNSSGPQINSLNGTSRNQLGYVLGCKVQNSRSDLEKEFPPSDEIDRSIFNEKSA
AGPCKYTNVAGPCKYTSNDGIPVVGRPHVYGDTDRQEYHYLPNSIDNRLEQKECQHFQND
DDPKLSRINTNESQFVFRPKIVDNSTDRRNANSEHVGGKDLVWNPNLERITRKPQCLEEH
PVKPSSSHTQSLADDLRETTRKLLANSQQFSRFDTRLKRHPLQKVSIGLATPRVRNYKNQ
TTEVLQTSENEHRMMEQSPWATDDSPPMDLDYENSEISRMLQNESETSNRVIYTNQTPRK
KRKLTYQFVPGKGQTKLVFK
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctgaattgctgtcatctgtcagagggaaatatacaacagttattctgacagaa
aaggagcgagacgtaacatccgttgtatcaaagcatgttgtgagaccagaacaaatatgc
ataccaactattgaaaagtttgacaacccaccagttactaaaatgaacacatcattcttg
gagataaatgaaataatagttacagagcatgatagacaatgtgaaagagccttactagac
agtccaatggtaaatggatattcctccaatataagctatagtgaaagtcctttacctctt
ccaggaaggcataaacttgaaatgccgtcatttgataaatgtttgattagtgcagagaag
aaagaaattttgattaaaaaactttggcaaagtcaaaagtattgtgatgagatacaagca
tcaagaattccagagccagatttatcaaatgaggtagaagacagagagcatgctattaaa
cagtctaagatgatattgaaggttaaatctgatacaagtactgggacttctgatttgaaa
ttaaattgggagatcagcagatacacagaggagataacagactcatgtaaactaattgtt
ccattctgtaaagacaacatcattgatgatgaaccattaaaagatgtggagccaatagaa
aaattctcaagtagagacctttatgattggaaagatgaagaaattccactcaaagatggt
aaagacaagaaaattggtgctgctgctgaaaaacaggttagatgtctcaagccacaaaag
ataactggtgatgtcaatcaagaaccaatgtcaattcagacattttcagatccactgggc
aacttcatggtcctacgttccaagaagacagcagaaaaatctgttaaccaaacaaaagag
aactcggtatgtgacaccaaactgcatgaacctgaaaagaactttggttgtgatagaaac
caagtagtgggaggtgcaataaagttgaagcaaaactttgaatccaagaagagagcaaaa
catcatgttgtgaaaatcaagttatcagaagattatcagcacatcctggatatattagaa
tcagcatctgaaaattgcataaatgtattgaagcaagctgctgaaatatcacagagttgt
acatttaagacaataacaccagacatttcaagatatttgcttaaacagaaagagaagagt
ttggcagatcatgatcaagaaaattcctctgatgaactctacaagatgactgtaattctt
catggtcttgttatggcatctgaaataacagtcaactgttgccttgaatcaggcatagga
tgtctgagtgcactgcaagaaaaatacaaacatgttattggatccaacttggatagcaca
agacaagttttgtttgaacttaaagcacagttttatgagaagaaaatttatcatccaaaa
gttgtgacattatgcagagaaattgaaacctggctaaagaaaaagagagcaaaaacaaaa
gattcagagcaaaagatcttagttctggtacagagggacatacctagtttgctgagttgt
ttgaaaaaagcattaaaccttggtaatttgctaagtccttgcatattgtcttcatctgaa
tcagaacatataatagatagcttagataaacataattgtgtaattgcacctacaaagatg
gtttgtgaaaatttcccatgggcgcagttcagccttgtggtagaatatgaaaatgaaaca
tcatcacaatggcaacaactttgtgagaggcagcatatacgacatattggactttgtata
cagtcagacaaacataaagatacaacaactttgactttggaatgtcctgaagaacagata
tgtctaattggatctcaaaaagttgtacagagcattgaacttctacaactattggaaaca
agacataacattcttctgctagtgagagattatagcctgataggaggtgccaagcatttg
ttcttttctgatattgatgttgatgcaagcacaggaattgtcttagaagacataaaagac
ttgaatgatgattgtgctgttcaaaaccttgttacaaagatggtggctcttagtttgaaa
tatgtcaactgctggttaatcttatttgcaaacaccaaaactggaagctaccagtatcca
ggccatgtcataaataatattggtagattacaggctgcagttgcaaattttgtagacaaa
tccagttactttaaagcaaggatattgttttgtgaaggttgcagtgaggtgtcctctata
gttcgaagcattagtgagaattgtatggctctcagcaaaacaaaagaacagtggttagat
aggacatggctgagggatgaaattcaacaggatgaaagggcattactcatgcttccctgt
cttagttcattcagctcccaattactattgaaaaaacttcctttaggaaggattttcaag
tcatcaatggttgatcttcaaagagatgtttcagaaataccttcttcaattttgcaaaca
ctggatgaatttgtaaggagcaatacaggattgcatcttcaagtagatactttagaagac
cagctgtatgaccagtgtgataatacaacttcacttgctaacaatgttgttgatggtgtc
gaaaattctgacagtcaaattaaagaatctttaagtcaagatcaaaatgaaaatgatgaa
gtgagtagagatatgtatgtttcagaggactttcaaagaaaaggcaggaccacaagatat
tatagccaccagcaattacacacagctatgaaaaacatcccagcacttccaaatgaagaa
aaggagattgatgcaatgctctgtgcagaaaacaaacaatcaaatgaaactgataaaaac
aacaaaatatgtattgatgatcaatctaaacatagaataaggtacaactatagttcagct
ggaagaacggaggattcaaaagaaaacaattttgattcagatgcaaaatttagaaaaatt
aaaaatactaaagaaaacatacatagaagtgcaaatgatcgtgttgaatgggaacatctt
gataatttcatttcaagtaacactaatgtaaacagactaacaacatgcaacaatgtcaca
aatgaaataaaaagcgacaagcatgaatatgaaatcagcaaaatgcaaaatgaaagatac
ttaaatccagtcgagaaacttacagcaatgaaagaaagtgataggttgaagaaatcagaa
agtgatgaaaaatatcataaatacatgcatacgggtaaggacaataataatgaaagtagg
tattttgttggagaagctatgagcataaataacagtaaatatttgtctagctatagtgct
gcaaattaccccagaaatcacagtgacagtactgaacatatacctcttgaaaacaagaga
aatgaaatgcttgctaatggaataaaaacaaggaaggcaatttcacaagagatgaaacaa
aatttatataaaagcaatgttagttatcctgttcaacctaaacagatctcaagttggagt
agtaattctacacaaacatttgattacaatcatgggttaccatttaacgttgagtcattg
gctgtcaatgagggggaaagtaattcatctggtcctcaaataaactccttaaatggcact
tctagaaatcagcttggttatgttttaggttgtaaagttcaaaatagtaggagtgatctt
gaaaaagaattccctccttctgacgagattgacagatcaattttcaatgaaaagtcagct
gcagggccatgtaaatacacaaacgttgcagggccatgtaaatacacgagcaatgacggt
attccagtggtagggaggcctcatgtttacggtgatacggatcggcaagaatatcattat
ttaccaaattccattgataatagacttgagcaaaaggaatgtcaacattttcaaaacgat
gatgatccaaaattaagtcgtattaacactaatgaatctcaatttgtcttcagaccaaaa
atagtagataactcaactgacagaagaaacgcaaattctgaacatgttggtggaaaggat
ttggtatggaatccaaatttagaaaggataacacgaaaaccacagtgtctcgaggaacat
cctgtaaagcctagtagcagtcatactcaatcgcttgctgatgatcttagggaaactaca
cggaagttacttgccaactctcagcaattttcaaggttcgacactcgtttaaaaagacat
cctttacagaaagtaagcataggcctggcaacaccacgtgtaagaaattataaaaaccaa
acaactgaagttttgcagacctctgaaaatgagcatagaatgatggagcaatctccttgg
gcaacagacgattctcctcccatggatttagattacgaaaattctgagattagcagaatg
cttcaaaacgaatctgaaacatcaaatcgggttatctacacaaatcaaactcccaggaag
aaaagaaagttgacttaccagtttgttcctggcaaaggtcaaactaaacttgtcttcaag
taa
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