Ruditapes philippinarum (Manila clam): 132760187
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Entry
132760187 CDS
T09557
Name
(RefSeq) transcription factor HES-4-B-like
KO
K06054
hairy and enhancer of split 1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03460
Fanconi anemia pathway
rphi04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
132760187
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
132760187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rphi03000
]
132760187
03400 DNA repair and recombination proteins [BR:
rphi03400
]
132760187
Transcription factors [BR:
rphi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
132760187
DNA repair and recombination proteins [BR:
rphi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
132760187
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hairy_orange
HLH
Motif
Other DBs
NCBI-GeneID:
132760187
NCBI-ProteinID:
XP_060608088
LinkDB
All DBs
Position
Unknown
AA seq
340 aa
AA seq
DB search
MSDTVNENRIMNSPNKMEKKDSAYKRSNKPFMEKKRRARINNCLTQLKTLVLQAMRKDTN
QYSKLEKADILEMTVKHLRQLQRQQVSQAMTCDPTVVTKYKAGFNECANEVMRYLGSVQG
VEGETRNRLMSHLGNVVTQLNSQTSEQCQQPLNVQIPHQSNQQGLHSAQNGCLLMPAVHT
SPLVLQQVQNLNVSNMYNQGQNSQQHPQRTAGNTAQLCGSFQIVPNTNSPSAVAVYLGQS
QPMQQNVHSTSAPVCNQAVPLYTSRSPPRTKASMKAYDSSAFSQVSNSDISDTSSSPSCS
PSSHEMTSYTASQMDINLQGLVKFGRTPSPLKVEDVWRPW
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacactgtcaacgaaaataggattatgaattcaccaaacaaaatggagaaaaaa
gattctgcttataaaaggagtaataaaccgtttatggaaaagaaaagaagggcacgcatt
aacaactgcctgacacagctaaagacgttggtgcttcaagcgatgagaaaagatacaaac
cagtactcaaagcttgagaaagcggatatcctggaaatgacggtaaaacacttacgtcag
cttcagcgtcaacaggtatcacaagctatgacctgcgacccgactgtcgtcaccaaatac
aaggccgggttcaacgaatgtgcgaacgaggtcatgaggtaccttggatcagttcaaggc
gtcgagggggaaaccagaaatagactgatgagccatttaggcaacgttgtaactcagtta
aatagtcagacatccgaacaatgtcagcaaccgcttaatgttcaaattcctcaccaatca
aatcagcaaggactacatagtgctcaaaatggttgtcttcttatgccagccgttcataca
tcgccattagtgcttcagcaagtacaaaacttaaacgtttcaaacatgtacaatcaggga
caaaactcacaacagcatccacaacgtacagcaggaaatactgctcagctgtgtggttca
tttcaaatagtgcccaacacaaactctccgtccgctgttgcggtgtacctcggacaatct
cagccgatgcaacaaaatgttcattccacctcagctccggtttgtaaccaagctgtacca
ctatatacctcgagatctccaccaagaacaaaagcaagcatgaaagcttacgattcttcc
gcgttttctcaagtatcgaactcagacatttcagatacttcgtcgtcgccatcttgttca
ccctcatcacatgaaatgacgtcatatacagcgtctcaaatggacattaatttacaggga
cttgttaaatttggtaggacaccgagtccattaaaagttgaagatgtttggcggccttgg
tag
DBGET
integrated database retrieval system
