Ruditapes philippinarum (Manila clam): 132760223
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Entry
132760223 CDS
T09557
Name
(RefSeq) double-strand-break repair protein rad21 homolog isoform X1
KO
K06670
cohesin complex subunit SCC1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rphi03036
]
132760223
Chromosome and associated proteins [BR:
rphi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
132760223
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
SMC_ScpA
Motif
Other DBs
NCBI-GeneID:
132760223
NCBI-ProteinID:
XP_060608141
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MFYAHFVLTKKGPLARIWLAAHWDKKLTKAHVFETNIDSSVEAIMKPKVKLALRTSGHLL
LGVVRIYSRKAKYLLADCNEAFVKIKMAFRPGVVDLPEDNREANVAAITLQENFHDFDAL
EDLHDIDMSAQFSTVNQSRPEEITMKEDLTTISFVGDDSFGDVGFDERELLRDAHFDESY
LKSPRQDISMQPIEKSHSMIAETSTAPAMDVDLPPLDDGFGGGGFMDIGNDDDDDDNDAD
SFGGGVDQEFLGEDLIAGGNLFEDTPAVPELPVTTPLPQQKDLPEQQQPVAPLDSMMTAT
PVPGTSGEQTTLITNENEAFALEPLDTTHMPGVERKKRKRKLIVDEQQGIPSETMKMQLS
DTSDIVTTLDLAPPTKKLMQWKETGGFEKLFALPGCAIRSRNILKMFKRNMKTRPSEDFD
ENEERLDLEAPEISREEDRSLAEKSKIGMSTIRPEISTIMEESSILETSKRSRRSDDPIP
EAPTPKTPRHSSSAHEQHPNVSDIFGQSVLEPHIDLPEVPSLIHPHYEDDGPPSIAPFSV
GPASVGPPSVGPISFGGDIEGGDQMPEDEEQEEQRWTKRTEQMQHTLDQGFRYTDELSFK
DMARKLNRKQVTSKFYTLLVLKKHKVVEVSQTEPFGDILIGKGPKFGIAC
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgttttatgcacattttgtcttgacaaagaaagggccacttgctagaatctggcttgca
gctcactgggacaaaaagctgaccaaggctcatgtgtttgaaaccaatatagacagcagt
gttgaagcaattatgaagccaaaggtgaagctagctttaagaacttctggtcatctttta
cttggtgtagtaagaatttactctcgtaaagctaagtacctgttggctgattgcaatgaa
gcatttgtgaagatcaagatggcttttagacctggtgttgttgacttgccagaggataat
agagaagcaaatgtagctgcaatcacattacaagaaaactttcatgattttgatgctctt
gaggatttgcatgatattgacatgagtgcccagttttctactgtcaaccagagtcgccct
gaagagattacaatgaaagaagatttaaccactatatctttcgttggtgatgacagtttt
ggtgatgttggttttgacgaaagggagcttctcagggatgcccattttgatgagtcatac
ttgaagagtccaagacaagatatcagtatgcagcctattgagaaatcccattcaatgatt
gcagaaacctcaactgccccagccatggatgtagatttaccaccattggatgatggtttt
gggggtggtggatttatggatataggaaatgatgatgatgacgacgacaatgatgctgac
agttttggaggtggtgttgatcaggaattcttaggtgaagatttgatagcaggagggaat
ctgtttgaagacacaccagcagtcccagagcttccagtgactaccccattaccacagcaa
aaagatttacctgagcaacaacaaccagttgctccactagattctatgatgacagccaca
ccagttcctggcacatcaggcgaacaaactacgcttattactaacgagaatgaagccttt
gctttagaaccactagacactacccatatgccaggtgttgaaaggaaaaagaggaaacgt
aagctgattgttgatgaacaacagggtatcccaagtgagaccatgaagatgcagctctcc
gatacatctgatattgtaaccaccttggatcttgcaccaccaacaaaaaaacttatgcaa
tggaaggagacaggtggattcgagaaattatttgctcttcctggatgtgcaattaggtca
agaaatatcctcaagatgtttaaacgaaacatgaagacacggccaagcgaagatttcgac
gagaatgaggaaagattggacttagaagccccagaaatatctcgcgaagaagatagatct
cttgcagaaaaatctaaaattggtatgtcaacaatacggccagaaattagcaccatcatg
gaagaatcctcaattcttgaaacatctaaacggtcgcgtcgcagtgatgatcctattcca
gaagcccccacaccaaaaactcctcgtcacagctcttcagctcatgagcagcatccaaat
gtatcagacatatttggacagtcagtcctcgaaccacacattgatttaccagaggtccca
agtttgattcatccacattatgaggatgatggtccaccatctatagcgccgttctctgtg
gggccagcctcagttggacctccttcagttgggcctatttcatttggtggggatattgaa
ggtggtgatcaaatgcccgaggatgaagagcaggaagagcagagatggacaaaacgtact
gaacagatgcagcacacattagatcagggattcagatatactgatgaacttagttttaaa
gacatggcacgtaaattaaaccgtaaacaagttacctctaagttctacacgctcttagtg
ttgaaaaagcataaagtggtagaagttagtcaaacggaaccttttggggatattttaatt
gggaaaggaccaaagttcggaatagcttgttga
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