Ruditapes philippinarum (Manila clam): 132760370
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Entry
132760370 CDS
T09557
Name
(RefSeq) regulator of telomere elongation helicase 1-like
KO
K11136
regulator of telomere elongation helicase 1 [EC:
5.6.2.3
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rphi03032
]
132760370
Enzymes [BR:
rphi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
132760370
DNA replication proteins [BR:
rphi03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
132760370
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
ARCH_RTEL1
Helicase_C_2
HHD_RTEL1
ResIII
DEAD
CIP2A_N
AhpC-TSA_2
Motif
Other DBs
NCBI-GeneID:
132760370
NCBI-ProteinID:
XP_060608338
LinkDB
All DBs
Position
Unknown
AA seq
1025 aa
AA seq
DB search
MPLLDIRGVNVNFPFDPYPCQVDYMNKVIECLQKDVNGVLESPTGTGKTLCLLCSSLAWQ
ESRKAQTELNKQVSVSHLLGSGADNLSAKSIEGIAKSLENSTGTSWGGSDFAVPKIIYAS
RTHSQLSQVIQELKRTAYNSVKVSVIGSRDQLCIHEQVKKEQNNTNKVHMCRAKVNARTC
YYYNHLDDLKKNSEPRVMMGNVVDIEDLVGYGQKNKVCPYYMARELKSDADITFMPYNYL
LDPKTRKAHGVELQGSVVIFDEAHNLEKICEDSSSFDLKPGDLATAIEEVTRLAEKMLEM
YKSEQMSESQFDDPSAGAELPDFTVDDLLRLKATLVDLEEEIDKIDVPYNSKGITKPGMF
MYELLAKANIVYGNKNIIVDTLDKIVSYVTADASGAGTGLSKGAGLSKITDILKIIFSQD
LAPGSSLIEHQEKTARSYKVHLQREDIGKKKKQMDLWTNSSAAEKSGKTLSYWCFSPGHS
MNDLKAHGIKCIVLTSGTLSPLSSFTAEMQVPFPVQLENPHVIQKHQVWVGTMRKGPDGT
VLNSNFETRFNPSYQSSLGNCIVNLARVTPNGLLIFYPSYPVMEKCLEHWKETNIWTRIE
QYKQIFVESRSKGVLNDLMNDFYSKINDPSLNGAIFIAVCRGKVSEGLDFSDINGRAVVI
TGLPYPPYLDPKVVLKMQYLDEMKGKQGFQSLSGKEWYKQQASRAVNQAIGRVIRHKEDF
GAIILCDTRFANPDAVRQLPVWVRPHVNKYDAFGLALKDVMVFFKTAEKMMPAPKPPKRS
VSSSSHGAYFMPTITRSGHAGPSGIQPAHAVMQHVPSLKHRGESVSNDKLREQYQSAGRS
ASSSSQKSLFSALDHSEKHQEERLPTSPLPSLQQSSTSGALRKQQSKKKIVIKKRASESA
PIIQESTEVSSKVSMSHLNSAESYIAEVKSTLSGDSYKMFSRALVEYKKTEDIDKVIEVL
ATLFTDDTAKHHLFAKFYRFVRAKHKEHFHIMCQELTGLATGYKAEDTVNKKRLQDNIAC
HGIID
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgccattacttgatatacgaggagttaatgtgaacttcccttttgacccttacccatgt
caggttgactacatgaacaaagtcatcgagtgcctacagaaggatgtgaatggtgtattg
gaaagtccgacaggtacaggtaaaacactgtgtctattgtgttcatctctggcatggcag
gagagtcggaaagctcaaacagagcttaataaacaggtgagtgtgtcccacttgttgggt
tctggtgctgacaacctctctgcaaagtctattgagggcatagctaaaagtctggaaaac
tccaccggaacatcatggggaggtagtgactttgctgtaccaaagatcatctatgcatca
cgtacacattcacagctgtcacaagtgatacaagagttgaaaagaacagcttataacagt
gttaaagtgagtgtaattgggtcacgagatcagctttgtattcatgagcaggtgaaaaaa
gaacaaaacaacacaaacaaggtgcacatgtgtagagcaaaagtgaatgcaagaacatgt
tactattacaatcatctcgatgatttgaaaaagaactcagagccgcgggtgatgatggga
aatgttgtggatatagaagaccttgttggatatggacagaagaacaaagtctgtccgtat
tatatggcacgagagctgaaatctgatgctgatataaccttcatgccatataactacctt
ctagatcccaagactagaaaagctcacggtgttgaattacaaggcagtgttgtgatattt
gatgaagctcataatttggagaagatatgtgaagatagttcatcatttgacctaaagcct
ggtgaccttgccacagcaatagaagaggtcacaaggttggctgagaagatgcttgagatg
tataaatcagaacagatgtcggaatctcaatttgatgacccttctgctggtgctgaatta
cctgattttacagtggatgatttgttaaggcttaaagctacacttgtagaccttgaagaa
gagattgataaaatagatgtcccctataacagtaaagggataaccaaacctggcatgttc
atgtatgaattgttagcaaaggcaaacattgtctatgggaacaagaatataatagtggac
accctggacaagattgtcagctatgttacagcagatgcttcaggagctggaactgggttg
tcaaagggagctggtctctcaaaaattacagacatactcaagattatctttagtcaagat
ttggcaccaggcagttcattaatagaacatcaggagaaaacagctaggtcgtacaaggtt
catttacaaagagaagacattggaaagaaaaagaagcaaatggatttatggacaaactcc
tctgctgcagagaaatcagggaagacattaagttactggtgttttagtccgggacacagt
atgaatgacctgaaggcacatggtattaaatgtattgtactgactagtggtaccctatct
ccgctctcatcatttactgcagaaatgcaggtaccatttccagtacagttagagaatcca
catgtcatacagaaacatcaagtatgggtgggtactatgaggaaaggtccagatggtaca
gtattgaactcaaacttcgaaactagattcaatccttcttaccagtcttctctgggaaac
tgtatagtaaaccttgcacgggtcactcccaatggactcctgatattttatccctcctat
cctgttatggagaaatgtcttgaacattggaaggaaacaaacatatggacaaggattgaa
cagtacaaacagatttttgtagagtcaaggtccaaaggtgttctaaatgatttgatgaat
gacttttacagtaagatcaatgacccgtctctgaatggagctatttttatagctgtctgt
agaggaaaggttagtgagggcctggatttctctgatataaatggaagggctgtagttata
acaggtctcccttacccaccttaccttgaccctaaagttgtcctaaaaatgcagtacctt
gatgagatgaaaggaaaacaaggatttcagagtttgtcagggaaagaatggtacaaacaa
caagcttccagggctgtgaatcaggctataggcagagtgattagacataaggaagacttt
ggtgctattattctctgtgataccaggtttgccaatcctgatgcggtgagacaactacca
gtgtgggtcagacctcatgtaaacaagtatgatgcctttggtctagctctcaaagatgtg
atggtgttctttaaaacagctgagaaaatgatgccagctccgaaaccacccaagaggtca
gtgtcctctagttctcacggtgcttactttatgccaactattacacgatcaggacatgcc
ggaccaagtggtattcaaccagcacatgctgtgatgcaacatgtaccaagcttaaaacat
agaggtgaatctgttagtaatgacaagttacgagaacagtatcaaagtgcagggaggtca
gcttcatcatcatcacagaaaagcttgttttctgctcttgatcattcagagaaacatcaa
gaagaaagattgcctacatcaccgctaccatctttacaacaaagctcaacaagtggtgca
ttaagaaagcagcaaagtaaaaagaaaattgtaataaagaaacgtgccagtgaatcagca
cctataatacaagagagtacagaggtatcttctaaagtttcaatgtcacatctgaactcg
gctgaaagttatattgcagaggtgaagagcacactaagtggagattcctataagatgttc
tcacgagcattggtggagtacaagaagactgaagatatagataaagttatagaagttctg
gctacactcttcacagatgatacagccaaacatcatctgtttgcaaaattttacagattt
gtaagggctaaacataaagagcattttcacataatgtgtcaggaactaactgggttagca
acaggttataaagcagaggatactgtaaacaagaaaagattacaggacaatatagcctgt
catggtataatagattaa
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