Ruditapes philippinarum (Manila clam): 132760397
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Entry
132760397 CDS
T09557
Name
(RefSeq) collagen alpha-5(VI) chain-like
Organism
rphi
Ruditapes philippinarum (Manila clam)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
EGF
hEGF
VWA_3
EGF_2
EGF_CA
PIN_5
SiaC
Motif
Other DBs
NCBI-GeneID:
132760397
NCBI-ProteinID:
XP_060608355
LinkDB
All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MEIVTAMFWTILFFIFSQFGGYEASHKCYFSLPKHSAVTFLSDTWRPSTYCCRGPETKSD
CYEETSPCPISEVTCLNSGTCLHNGGCKCRPVFTGHYCEIDINECASSPCLNGATCIDRV
NGFHCVCPPRLYGVLCDTNICHPTPADVVFVLDSSVSMTEREFKKQLQFVANFSSKVPIG
PHDFQISVVTFSTDAHVEFYLNQYKDNISLHNAITKVKYRRGTTRTDKGLKAVRTEVFTA
GNGIGIRKNGTKAARFVYVLTDGMSINRADTRAEASEMKKYVDTIAVIGIGNEVLHQELL
DIASDPSFVYSVKNFNSLYTILRQLVQLCDECETSTATDVAIVLDSSYYITAEQFTLMVD
AIMHIIDTMNHLNVNGTHVSVTTFSDDIKSIMNMGETFNKNVIKSKVNMVSKSPDEHQAQ
LHLETVFAYVRDKIFNNTFSMRIAKKFLLIFTNGKARVNSKSTFESEKSMLEADGVNIVA
VGSGEDIDMNGLIQLVTDTFNVFVTSHELLMNNLDVLQSEFVYSKCNITGE
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggaaatagtcacagccatgttttggactatattgttctttatattttcacaatttgga
ggatacgaggcatctcacaaatgttacttctcattaccaaagcatagtgctgttacgttc
ttgtcggatacatggagaccttctacgtattgctgtagagggcctgaaacgaaaagtgac
tgctatgaagagacatctccctgtcctatatctgaggtaacctgcctaaatagcggtaca
tgcctgcacaatggcggatgtaaatgcagaccagtatttacagggcactattgcgaaatt
gatataaatgaatgcgcaagttccccgtgccttaacggcgctacttgtatagatagggtc
aatggattccattgcgtttgtcctccaagactgtatggggtattgtgtgacacaaatatc
tgtcatcctactccagcagacgtcgtctttgttttagattcatcagtgagcatgacagag
cgagaatttaagaaacagctgcaatttgttgctaattttagcagtaaagttcctattgga
ccacacgacttccagattagtgtagttacattctcaactgatgctcatgtagagttctat
cttaaccagtataaagacaacatttcacttcataacgctataacgaaagtcaagtataga
cgtgggacaacgcgtactgacaaaggcctgaaagcggttagaacagaagtattcacggca
ggtaatggcatcggaatacgcaaaaatggtacaaaagctgcgagatttgtttatgtcctt
acagacggcatgtctataaacagggccgacacaagagccgaggccagtgaaatgaagaaa
tatgtggatacaattgcagtcattggaataggaaacgaagttttacatcaagaacttttg
gacattgcctccgatccatcgtttgtttactctgttaaaaatttcaactctttgtacacc
attcttagacaattggtccagttatgtgatgaatgtgaaacaagcacggcgacagacgta
gctatcgttttagattcatcctattatataacagcagaacagttcactttaatggttgac
gctattatgcatataattgacactatgaatcatttaaacgtaaatggtacgcatgttagt
gtgaccacattttctgatgacatcaaaagtataatgaatatgggagagacgttcaacaaa
aatgtcattaaaagtaaggttaacatggtctcaaagtcgcctgatgaacatcaagcacaa
ttacatcttgaaaccgtttttgcatatgtcagggataaaatttttaacaatacattttca
atgaggattgcaaagaaatttctcctaattttcactaatggtaaagctcgtgtgaacagc
aaaagcacttttgaaagtgagaaatctatgctagaagccgacggagtaaatattgttgcc
gttggcagtggagaagatattgacatgaacgggttaatccagcttgtaacagatacgttt
aatgtttttgttacaagtcatgaattgctaatgaacaatctagacgttttgcaatctgaa
tttgtttacagcaaatgtaatattacaggggaatga
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