Ruditapes philippinarum (Manila clam): 132760465
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Entry
132760465 CDS
T09557
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT domain- and WD repeat-containing protein 1-like
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rphi04990
]
132760465
Domain-containing proteins not elsewhere classified [BR:
rphi04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
132760465
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40
AAA_16
NACHT
EIF3I
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
DUF4062
Beta-prop_TEP1_2nd
AAA_22
NPHP3_N
NPHP3
nSTAND1
ATPase_2
NBCH_WD40
AAA
Motif
Other DBs
NCBI-GeneID:
132760465
NCBI-ProteinID:
XP_060608421
LinkDB
All DBs
Position
Unknown
AA seq
1594 aa
AA seq
DB search
MECPSQAKIIRIFTSSTFTDTKQERNMLMKFAYPKLKEYCRKIGYEFQVVDMRWGIRDEA
TDDHMTTELCLKELKLCQKLSTGPNFVSLLSHKYGYTPFPRVIESGEFEKIFNNVEAKGA
KDLFQNEEEGREGGKHITWFGEEITETETEEGLKPNMAKDHFLWLNRIIEDIEKQESSYA
LSRYIECTGPEEKVQRARQMLKELKEDKLKKSLDPTKILNYSVKWSATGIDPNSSEEHKK
YLESMCDDFVQHMIGMVEKSVAEKENITDPLKEECLQHIRFCQSKCEGFTGREETLEKIK
SYVTSSGAGGNQPLVLHGTSGTGKTSILAKAAEMVRSWMSTPPVIILRFLGTSPDSSDLM
SLLYSICSQIRQVYNLRPLPRTQNITVQINDFELMMKESRPNLPLVLILDSLDQLDHAYN
ARQMTWLLPKLTPTTKVILSTLPEPIYQCFPALQSVITTPENYLDVPVLETTSVKSILNK
WLEMQKRKLTDEQQTIILKGFEKCSTPLFLKLSFEESTTWTSFYPLEKTVLQSTVRESIE
HLFEKLEKMHGKILVTRALSYLTLAHNGASEAELEDILSCDDDVLNDVYMYWTPPVRRLP
PLLLVRVRNDLSQYLVERGADGTRVMYWYHRQFTEAAEARYCSDPEQNKVIHSNLADFFN
GTWANGTKKPFTTSRGQLGEEDRHVSAQPLKFGEDYNIRSLSNLPYHRIKACDGKLLEQQ
CLANVYFLMSKIGAMPLTATLNDFVSAIEAFPDNDLIKMIYDSMLLSQKGLVTDPGQIVP
QLLGRLEENHVNKEFIDQCRAYPKTFIEPGERILERPGGQLVHCVAAHRSKISMMDITKD
GKLVVTVCEFDHEISLWDIKTGRLKRRSFGMKQCMKALFCCGDKLLACKMDKTVSVEEVQ
TGKLYCTVNLPSSETSICVAGKDKCLLLAFTQFTCFIYDLHDNGNLIKPLLHPEKLKFGS
KSLTEVTDNFVAVTDSEQIFITVLDLKSMTFMEKFRGFDIIYDEDGEEKDEYPVDALSIH
PDETHLAYTTVLTSEIIFADFHGNKIRNMLENGDRIFSSIDFTPDGKHFYVHNAKQLHFF
NTATLDEVDVLDNSQRLVTSKTVDMKTVITVAADCNLRIWDLTRSKQPTTYSADNNLSQK
IKFLFEYWSLEPTRYMFVAGTATLESSDALFGVYDCITDKFIKIRTMGKFSSLRVVRKDA
TRVLVIRNRKLFVINLNTMDIETKLQGFASKFYEYNAFRYLPRNQLICYTKAYKNLKIYD
LSTGKVACVLRAGQTMNLKSLIVNSTGTVACASSDEGPIILYDLVDQKVMYTIPSKPDYD
EFFGQYKWINAEGTRLIFSTEGMLPNMTKGDSVEHLVVWDIQNKKELFRMYDSVYQQKYR
SLNNMDKTSVNHMDKTSVEDLCQLDDRRMITSNSDKILRVYDLDTGKLLHRLEGHTTPVH
LRLHEKSPYILTFGRFEEDCIRLWEKTTYKQVATFSLDKTIRDLFWSGCGRYFYTMTSKP
AKVLRWKIHYGHNEVPDVSFDEDSQSMFSSKAEFEPLEIEIPEDVKIPTEEGDPDDDVEE
PSDDEDDDDVKVPSDEEDDVEVPSVDEDDNHGDD
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atggaatgtccatcacaagcgaaaattatccgtatctttaccagcagtacatttacagat
acaaaacaagagagaaacatgttgatgaagtttgcctaccccaaactaaaggagtattgc
cggaaaataggttacgaatttcaagtggtagacatgaggtgggggatccgagacgaggct
actgacgatcacatgacaacggaactttgcctcaaagagttgaaactgtgccagaaactc
tcaactggaccaaactttgtttctcttctctcccacaagtacgggtatacaccattccca
agagtgatagagtctggagaatttgagaaaatatttaataatgtcgaggctaaaggagca
aaagatctatttcaaaacgaagaagagggaagggaaggtggcaagcacatcacatggttt
ggggaagagataacggaaacggagacagaagaagggcttaaacccaatatggcgaaagat
cattttctctggctgaatagaattatcgaagacattgagaaacaagaaagcagttacgct
ctgtcaagatatatagaatgtactggtccagaagaaaaggtccaaagagctaggcaaatg
ttgaaggaattaaaggaggataaattgaaaaaatctctagaccctacaaaaattcttaat
tacagcgtcaaatggagtgctactggtattgatccaaattcgtcggaagagcacaaaaag
tacttagaatcaatgtgcgacgactttgtgcaacacatgattggcatggtggaaaagtct
gtagcagaaaaagaaaacatcaccgatcctctgaaagaggagtgccttcaacacattcga
ttctgtcaatccaaatgtgaaggttttactggaagagaagaaacattagagaaaatcaaa
agctacgtgacaagttccggtgcaggaggcaaccagccgctagtgttacacggaaccagt
ggtaccggaaaaacctctatactcgccaaagctgctgagatggttagatcgtggatgagt
acaccgcctgttatcattttgagatttttgggaacatctccagacagttctgatttgatg
tcgctgctttatagcatatgctctcaaataagacaggtctataatcttagaccactgcca
agaacacagaacataacggtacagataaatgactttgaattgatgatgaaggagagtcgt
cctaaccttcctctggtgctgatcctggattcacttgaccagctagaccacgcctacaat
gctagacaaatgacttggttgcttcccaaattaacacccacaacaaaagtgattctttca
acattaccggagccaatttaccagtgtttcccggcgttgcagtcagttatcaccacacca
gaaaattatttggacgttccagtgcttgaaacaacaagtgtgaaaagtattctaaataag
tggctagaaatgcagaaaagaaaactgacagacgaacaacaaacaataatattgaaaggt
tttgaaaaatgttctacccctcttttcctgaaactatcgttcgaggaaagtacaacttgg
acatcattttatccgctcgagaaaaccgtgctacaatctactgtgcgtgaaagcattgaa
catttgttcgagaaattggagaagatgcacgggaaaattcttgtaacgagagcgctatct
tatcttactttagcgcacaacggagcttccgaagctgagctcgaggacattttgtcgtgt
gatgatgacgtgctgaatgacgtgtacatgtattggacacccccagtaaggagattacct
cccttacttcttgtaagagttaggaatgatcttagtcaatatttagttgagagaggggca
gatggaactcgagtaatgtactggtatcaccgacagtttacggaagctgccgaagcccgt
tattgttcggatcctgaacaaaataaagtcatccattcaaatctggctgacttcttcaac
ggaacctgggctaacggtaccaaaaagcctttcacaacatctagaggccagctaggtgaa
gaagatcgtcacgtgtccgctcagcctctgaagtttggggaggactacaatattcgctcc
ctcagtaacctcccttaccacagaattaaagcttgtgatggaaaacttctagaacagcaa
tgtcttgctaacgtttactttctaatgtcgaaaatcggagccatgcctctgacagcaacg
ttgaatgattttgtctcggcgattgaagcatttcccgacaatgatctgatcaagatgata
tatgattccatgttgttatctcagaaaggtcttgttactgaccctggacagattgttcct
caacttcttgggagattggaggaaaatcatgtaaacaaagagttcatagatcaatgtaga
gcatatccgaaaaccttcatagaaccgggagaaagaatactagagagaccagggggacaa
cttgttcattgtgtagcggctcacagatctaagattagcatgatggatataaccaaagat
ggcaaacttgttgtcactgtttgtgagtttgaccatgaaataagtctgtgggatataaaa
acaggacggcttaagaggagaagttttggaatgaaacagtgcatgaaagctctgttttgt
tgtggtgacaaattgttagcttgtaaaatggataagactgtttccgtggaggaagttcaa
acaggaaagttgtattgcactgtcaatctaccttcatctgaaacaagcatatgtgttgct
gggaaggacaagtgtttacttttggcattcacacaatttacctgctttatatatgatctc
catgacaacgggaaccttatcaagcctctgttacatcctgaaaaattgaagtttggaagc
aaaagcttaactgaagttacagacaattttgttgctgttaccgactcagagcaaatattt
atcaccgtccttgaccttaaatccatgaccttcatggaaaagttccgaggatttgacatt
atttatgatgaggatggtgaagaaaaagatgagtacccagtagatgcactttccatacat
cccgatgaaactcatctagcatataccactgtgttaaccagtgaaatcatattcgctgat
ttccatggaaacaagatcagaaatatgctagagaatggtgaccggatatttagtagtata
gattttacgccagatgggaaacatttctatgtccataatgcgaaacagcttcatttcttc
aacactgctactttagatgaagtcgacgtgctagataatagtcaaagattggtaacatca
aaaacggtggacatgaaaacggtgatcactgtagctgctgactgtaatttacgaatctgg
gacctgacgagaagtaaacagcctacaacttacagcgcggacaataatctatctcaaaag
ataaagtttctatttgaatattggtcattggaacctacaagatacatgttcgtagcaggt
acagccacgttagagtcgtcagatgcactgtttggcgtttatgattgtatcacggacaag
tttattaaaatacgaacaatgggaaaattctctagcttaagagttgttcggaaagatgca
acaagggttttggtaatacggaatagaaaactatttgtcattaatttgaacacgatggat
atagagacaaaacttcaaggcttcgcaagcaaattttacgaatataacgctttcagatat
ctgcctcggaatcagctaatttgttatacaaaggcatacaaaaaccttaaaatctacgac
ctaagtacgggtaaggttgcgtgcgtcttaagagcgggacagactatgaatttaaaatca
ttaattgtgaatagcacaggaacagtcgcgtgcgcatcttctgatgaagggccgataatt
ctgtatgatcttgtggaccaaaaagtgatgtataccattccttcaaagcccgattacgac
gagtttttcggtcagtataagtggataaatgctgaaggtacacgacttattttcagcacg
gagggaatgttacctaatatgacaaaaggggacagtgttgaacatctcgtagtttgggac
atacaaaacaaaaaagagttgtttagaatgtacgacagtgtatatcaacaaaaatatagg
tcactgaacaacatggataaaacatcggtgaaccacatggataaaacatcggtggaagat
ctttgtcaacttgacgatcgccggatgattacatcgaacagtgataaaattcttcgagta
tatgatttggacactggaaaattgctgcatagattggagggacatactacgccagtccat
ttacggctgcacgaaaaatctccatacattctcacatttggacgttttgaggaagactgc
attcgactgtgggaaaagacaacttataaacaagttgcgacattctcgcttgataaaacg
ataagggatttgttttggagtgggtgcgggcgatatttctacacgatgacaagtaaacct
gccaaggtattaagatggaaaatacattacggacataacgaggtgccagatgtcagtttt
gatgaagattcccaatctatgttctcatcgaaagctgaatttgaaccattagagatagaa
ataccggaggatgtcaaaatccctactgaagagggagatcccgatgacgatgttgaagaa
ccgagcgatgatgaggacgatgacgatgttaaagtaccgagcgatgaagaggacgatgtt
gaagtaccgagcgttgacgaagacgataaccacggtgacgattaa
DBGET
integrated database retrieval system
