Ruditapes philippinarum (Manila clam): 132760508
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Entry
132760508 CDS
T09557
Name
(RefSeq) F-box/LRR-repeat protein 18-like
KO
K10284
F-box and leucine-rich repeat protein 18
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rphi04121
]
132760508
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
132760508
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_FBXL18
LRR_EndoS
F-box-like
F-box
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
132760508
NCBI-ProteinID:
XP_060608479
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
METQDTFSWFDHISDDILLHILCAVPRNDWKNVIKVCVRFRNVCHDKDLFRYSDLACAYG
MSDRELEDYIRAGNRYIERLNLNHCYWLSSSTLSAFIPRCKKIQELFLLDCKLTSKALTK
IICSIECLKSIVFSVYNLIEFSNIINGNQEVQSSLKHLKHFGLHIREELNGNKQNSLQFH
LSQQTTVIEYCPDLESFCVIGTPGLSQKLSKRLVHSLIVKREHLKSLKTMSINCTNDATS
RLYFFGILVKAFDEPGIHFTNLSVSGLDLKQAVKRSYFIRSLKESCPTLQNLDLSKVLID
ELEASITIEDAPCLKHLNLADIRSESRCLGLLISASNCSNLVSLNLKGATSGCRYWQKEE
LEGLDLVLKNCVHLQHLNISGVHVHENESDKTLVDILTQHDISAFKSLALSVCCLVNTKE
KGKSTKGFISKGLGKRQRIARQPQPSTSTSEGPDSNAPTSTELSRLCKACPRVTSLELIN
TGFNQSVIHSSHKSVYDPCKISHMLRENDLSGISYLTNLRYLQLTGLPGISNGKFLKEIA
TKCVQLDTLWLAYIGLGPQIPGIWDSLKFFKNLLDLRIEQPWMKLDDSFYQSCLGCEQLQ
RLVIVSKNSRFEPKPLENFLTKATNVYVIQLFTDTTLKDCDRYQAVLQKRFESQRPGFHA
VLEHLHHERVPAVLAALPLVHLDEITQLSSIVCSKPLLSLWGD
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgcaagacacatttagctggtttgaccatatttctgacgatatattgctacat
attttatgtgctgttccaaggaatgattggaagaatgtcattaaagtatgcgttagattc
aggaatgtatgtcacgacaaggatctgtttaggtattcagatttagcctgtgcctatgga
atgtcagatagagagctggaggactatatccgtgctggcaatagatacattgagagactg
aatttgaaccactgttactggctctcatcatctacactatctgcattcatacctagatgc
aagaaaattcaagagctttttcttctggattgtaaactcacttctaaagccctaaccaaa
atcatatgctcaatagagtgcctcaagtcaattgtgttctctgtttataacttaatagaa
ttttcaaatataatcaatggaaatcaggaggtccagtcctctttgaagcatttaaaacac
tttgggttacatatacgagaggagttgaatggaaacaaacagaattcattacagttccat
ctaagtcagcaaactactgtgatagaatactgtcctgatctagaatcattctgtgtcata
ggaactccaggactaagtcagaagttatcaaaaaggctggttcattcactgattgtcaaa
agagagcatttaaaaagtttaaaaacaatgtcaatcaactgtacaaatgatgccacttca
agactttattttttcggaattctagtcaaagcatttgatgagccaggtattcactttaca
aacttatcagtgtcaggattggatttaaaacaagcagttaaacgttcatactttattcgt
tctctcaaagagtcatgcccgacattacagaatcttgatttgtctaaggtgctgattgac
gagctagaggcgtccattactatagaagatgctccgtgcttgaaacacttgaacctggct
gatatcaggtcagagagtcggtgccttgggctcctcatcagtgccagcaattgttcaaac
ctagtcagtcttaatctaaaaggtgctacatctggctgcaggtattggcaaaaggaagag
ttggagggccttgacctcgttttgaaaaactgtgtccatctacaacatctcaatatctcc
ggtgtacatgtacatgaaaatgagtcggacaagactttagtggatatacttacccagcat
gatatctcagccttcaaaagtcttgctctgtcagtatgttgtttggtaaacacaaaagaa
aaagggaagtccacaaaagggttcatcagtaaaggactgggaaagagacagaggattgct
agacagcctcaaccatctacatctacatctgagggtcctgatagtaatgctcccacttct
acagagttatcccgcctttgcaaagcttgtccaagagttacttcccttgagctgataaat
actggcttcaatcaaagtgttatacactctagtcataagtctgtgtatgacccttgtaaa
atttcccatatgttaagggaaaatgaccttagtggaatatcttatctaacaaatctgcga
taccttcagttgacagggctaccaggtatctcaaatggtaaattcttaaaagagattgcc
accaaatgtgttcagctagacaccctatggctggcctacatcggtctcggacctcagatt
cctgggatttgggactctctcaagttcttcaaaaatttattagatctcagaatagaacag
ccttggatgaaattagatgacagtttttatcagtcatgtctgggctgtgaacagctacaa
cgccttgtcatcgtgtccaagaactcaagatttgaaccaaaaccattagaaaatttcctt
acaaaggcaaccaatgtttatgtaatacagttatttacggacaccactttaaaagattgt
gaccgttatcaagcagttttacaaaagaggtttgagagtcagcgaccaggatttcatgca
gtattagagcacctgcaccatgagcgagtgccagccgtgcttgcagccttgcctctagtc
catctagatgagatcacacaactgtcttccatagtctgctcaaaaccattactctccctc
tggggagattga
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