Ruditapes philippinarum (Manila clam): 132760588
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Entry
132760588 CDS
T09557
Name
(RefSeq) WD repeat-containing protein 36-like isoform X1
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
132760588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rphi03009
]
132760588
Ribosome biogenesis [BR:
rphi03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
132760588
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF4
WDR90_beta-prop_4th
PEP5_VPS11_N
Beta-prop_EIPR1
Beta-prop_VPS8
Beta-prop_WDR19_1st
Beta-prop_Vps41
WD40_RFWD3
NBCH_WD40
Beta-prop_LRRK2
Beta-prop_IFT140_2nd
TAF1C_beta-prop
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
132760588
NCBI-ProteinID:
XP_060608573
LinkDB
All DBs
Position
Unknown
AA seq
912 aa
AA seq
DB search
MFNVIMPAPSKIFTGYRALGFVSNHVPLAVRYHQKHKENYVVTCVGKCFHTYNCSKLGIV
SVSDSHPEDISVLAVDRDLTFTACRNVIRAFTRGRQVIHVYEGHTADVHLLLPFGNHLIS
VDVDSSVIVWDIKSQGQYSEIQFNKTSFEITTVTHPSTYLNKILFGSKQGRLELWNIKKN
TMIYSFKGWGQPVTVVEQAPAVDVVAIGLANGQIIIHNLKFDETITKFLQDWGPVTTISF
RTDGHPIMATGSATGHIALWDLEERKLRSQMREAHMTSVSGMQCLPSEPLMVTSSADNTL
KVWIFDLPDGGGRLLRNRSGHSAPSTKLRHYGTDGQNIVTAGQDSTMRSFSTVHDKHHKS
LGRASYNKQLSKKNTLKYDEHKMPYIVDFATEQTRQSDWDNILACHRGLRVVTTWNYVKS
TMGQHKFDHKRFTKNAAQHMHTVAQCVEITSCGNFGLIGYSSGHIDVYNLQSGIHRGSFE
DHSGEQAGIKQAKAHNSHVQGVVVDGLNQLAISAGREGDIKFWKFKDKKLLDTCKLDSTV
SKILLHRESSMMAVARDDFHVYIIDIDTRKVVRKFIGHDNRITDMTFSADARWLITAAMD
CTLRVWDLPTGRLVDCFLVDSAVMSLSMSPNYDFLATCHLDDVGIYLWANKTLFSHVPLT
ALPSNYEPQMIEMPTTRKHTAAEDVDEDIKEEEEEFIRAEFKSSEQISHELITLSLLPNS
RWQNLLNLDVIKQRNKPREPPKAPKAAPFFLPTVAGLEPKFAVDDEGAGEGRNKGKVQAG
NLMPLCTLGQLLKEGSSKSNYDKVTEYMKSLGPSAVDVEIRSLAPEMGGSVVVMCNFLQF
VQSVLQTNKNFEIIQAYLGLFLKVHSEILSSEPEVVKELEKLSDLQSTSWCTVQDLFNQT
LCLVNYLRTAVL
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatgtaattatgccagccccgagtaagatattcacagggtatcgtgctcttgga
tttgttagcaaccatgttccactggcagttcgttaccaccagaagcacaaagagaattat
gttgtaacttgtgtcggaaaatgtttccatacatataattgttccaagcttggcattgtt
agtgttagtgacagtcaccctgaggatataagtgttctagcagtggatagagatcttaca
tttactgcttgtagaaatgttatcagggcattcacaaggggaaggcaggttatacatgta
tatgaaggtcatacagcagatgtacatctattgttaccgtttggaaatcatctgatatca
gtggatgttgacagttctgtcattgtatgggatatcaagtctcaaggtcaatattctgag
attcaattcaacaagaccagttttgagatcaccacagtgacccacccaagcacgtacctc
aacaagatactatttggtagcaagcaaggcaggttggagttatggaatatcaagaaaaac
actatgatatattcatttaagggatggggtcaaccagttacagttgttgaacaggcacca
gccgtagatgttgttgcgattggcttagctaatggacagattatcatccataatctcaag
tttgacgagacaattacaaagtttttacaagactggggtccggtcactaccatatcgttt
agaacagatggtcatcctataatggcaacaggaagtgctacaggtcatattgcattatgg
gatctggaggagaggaagttgcgcagccagatgagagaagctcacatgacatctgtatca
ggcatgcagtgtttgccgtcagaacctttgatggtcacttcatctgctgataatacattg
aaggtgtggatatttgatttgccagatgggggtggaagacttctgcgtaacaggtcagga
cactcggcaccttccacaaaattgaggcattatgggacagatggtcagaacattgttaca
gcaggtcaggacagtacaatgaggtcattttccacagtacatgacaagcaccacaaaagt
cttggcagggcctcgtacaataagcagcttagtaagaagaacacattgaaatatgatgaa
cacaagatgccatatattgttgactttgctacagaacaaacaagacagagtgattgggac
aatattctggcgtgtcacagaggcctgcgtgttgttactacctggaactatgtaaagtct
actatgggtcaacataaatttgatcataaaagatttacaaagaatgccgctcagcacatg
cacactgttgctcagtgtgtagagatcacatcttgtggtaactttggtctgattggctac
agttctgggcatatagacgtgtataatctacagtctggtatacatagaggaagttttgag
gatcattctggggaacaggccggcattaaacaagcaaaagcacacaattcccatgtacag
ggtgtagttgttgatgggttgaatcagctcgctatctctgcaggcagggagggtgatata
aagttctggaaattcaaagacaaaaagctgttggacacatgtaaactggactccactgtt
tctaagatactccttcatagagaaagttcaatgatggctgtggcaagggacgatttccat
gtttatattatagacatagatactagaaaagttgtaagaaagttcataggtcacgataac
agaataacagatatgactttcagtgcagatgcaagatggttgatcacagctgccatggat
tgtacactcagagtctgggatctaccaaccggcagattggtagattgtttcttggttgac
agtgctgtaatgtcattgtcaatgtcaccaaactacgatttcctcgccacttgtcacctt
gacgatgtagggatctacctgtgggccaacaaaacactgttctcacatgtgccacttaca
gcgttgccaagcaactatgaaccacagatgattgaaatgcccacaaccaggaaacatact
gcagcagaagatgttgacgaggatattaaggaagaggaagaagaattcatccgtgccgag
ttcaaatcttccgagcagatcagtcacgaattaatcacactttcgttactacccaactct
agatggcagaatctgcttaacttagatgttatcaagcaaagaaacaaacccagagagcca
ccaaaagcacctaaagctgcacccttctttctgccaactgtagccggcctggaacctaaa
tttgctgtagatgatgaaggtgctggagagggcaggaacaagggtaaagtccaggcagga
aatcttatgccattatgtacattgggacagttattaaaggaaggaagttcaaaatcaaac
tatgataaagtcacagagtatatgaagagccttggaccttcagctgtggatgttgagatt
cggtccctggcaccagagatgggtggctcggtggtagtcatgtgcaattttctacaattt
gttcagtcggtcttacagaccaacaaaaactttgaaattattcaggcttatttaggattg
tttctaaaggttcatagtgaaattctgtcaagtgagccagaagttgtgaaggaactagag
aaattatctgatctacagtcaacctcatggtgtactgtacaagatttgtttaatcagaca
ttatgtttagttaactatcttagaacagctgtgttatag
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