Rapeseed phyllody phytoplasma: RP166_4160
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Entry
RP166_4160 CDS
T10382
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
rphy Rapeseed phyllody phytoplasma
Brite
KEGG Orthology (KO) [BR:
rphy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rphy03016
]
RP166_4160 (truA)
Enzymes [BR:
rphy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
RP166_4160 (truA)
Transfer RNA biogenesis [BR:
rphy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RP166_4160 (truA)
Prokaryotic type
RP166_4160 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Pua-like
Motif
Other DBs
NCBI-ProteinID:
QKX95403
UniProt:
A0A859I9S1
LinkDB
All DBs
Position
363909..364640
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AA seq
243 aa
AA seq
DB search
MQHFFYKLILSYDGTCYYGYQKQPQKITVQQTFEKALKKMTHQNIPNFAASRTDKGVHSQ
GQTLHFQTTFFLKPTHFQKTLNYFLPPDIRVRQMNFATPNFHARYSAKSKIYQYVFSKKP
LNAFNHHFQIFADKLDFDKITKALKFIEGTHNFFAFTSETQPKNFFKTIFQAFLKETSHK
YILVFHGNGFLKYMIRFLVGSLIEIGKNKLSLEQFQAMLLGNTTKKATLLAPAKALVLKK
IFY
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
ttgcaacactttttttataaattaattttaagctatgatggcacttgttattatggatat
caaaaacaacctcaaaaaataaccgttcaacaaacttttgaaaaagctttaaaaaaaatg
acccatcaaaacatccctaattttgcagctagtagaaccgataaaggagtccattcccaa
gggcaaaccctccatttccaaaccactttttttctaaaacccacacatttccaaaaaact
cttaattattttttgcctcctgatattagagttagacaaatgaactttgccactcctaat
tttcatgctcgttattcagcgaaatcaaaaatttatcaatatgttttttccaaaaaacct
ctcaacgcttttaaccatcattttcaaatttttgctgacaaacttgattttgataaaatc
accaaagccctaaaatttattgaaggcacccataatttttttgcttttactagtgagacc
caacctaaaaatttttttaaaaccatttttcaagcctttctcaaagaaacttcacacaaa
tatattttagtttttcatggaaacggttttttaaaatatatgattcgttttttggtagga
agtttaattgaaattggtaaaaataaactttctttggaacaatttcaagcgatgttatta
ggcaacacaactaaaaaagccacccttttggctcctgctaaagccttagttttaaaaaaa
attttttattga
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