Rapeseed phyllody phytoplasma: RP166_6790
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Entry
RP166_6790 CDS
T10382
Symbol
pdhD
Name
(GenBank) dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
rphy Rapeseed phyllody phytoplasma
Pathway
rphy00010
Glycolysis / Gluconeogenesis
rphy00020
Citrate cycle (TCA cycle)
rphy00260
Glycine, serine and threonine metabolism
rphy00280
Valine, leucine and isoleucine degradation
rphy00620
Pyruvate metabolism
rphy00630
Glyoxylate and dicarboxylate metabolism
rphy00640
Propanoate metabolism
rphy00670
One carbon pool by folate
rphy00785
Lipoic acid metabolism
rphy01100
Metabolic pathways
rphy01110
Biosynthesis of secondary metabolites
rphy01120
Microbial metabolism in diverse environments
rphy01200
Carbon metabolism
rphy01210
2-Oxocarboxylic acid metabolism
rphy01240
Biosynthesis of cofactors
Module
rphy_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
rphy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
RP166_6790 (pdhD)
00020 Citrate cycle (TCA cycle)
RP166_6790 (pdhD)
00620 Pyruvate metabolism
RP166_6790 (pdhD)
00630 Glyoxylate and dicarboxylate metabolism
RP166_6790 (pdhD)
00640 Propanoate metabolism
RP166_6790 (pdhD)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RP166_6790 (pdhD)
00280 Valine, leucine and isoleucine degradation
RP166_6790 (pdhD)
00310 Lysine degradation
RP166_6790 (pdhD)
00380 Tryptophan metabolism
RP166_6790 (pdhD)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RP166_6790 (pdhD)
00670 One carbon pool by folate
RP166_6790 (pdhD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rphy04147
]
RP166_6790 (pdhD)
Enzymes [BR:
rphy01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
RP166_6790 (pdhD)
Exosome [BR:
rphy04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
RP166_6790 (pdhD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
HI0933_like
DAO
GIDA
AlaDh_PNT_C
FAD_binding_2
FAD_binding_3
NAD_binding_8
2-Hacid_dh_C
Thi4
Trp_halogenase
UDPG_MGDP_dh_N
3HCDH_N
Lys_Orn_oxgnase
NAD_Gly3P_dh_N
HNF-1B_C
Motif
Other DBs
NCBI-ProteinID:
QKX95633
UniProt:
A0A859IAF2
LinkDB
All DBs
Position
655318..656691
Genome browser
AA seq
457 aa
AA seq
DB search
MKNYDVLVIGGGPGGYVAAIKAAQMGAKVALVEKHKLGGICLNYGCIPTKAYLKSAKMYK
DIKRCADFGIKVQNGVSFDWSSILSRKNKIVAQLTTGISFLLKKNKIDFYHGFASVLSPC
EVQVDTNLLHTQKLIIATGSTAFVPPIPGAQEAYQKGILKTSKELLQLESYPSKVTIVGG
GVIGVEFATIFNSFGSEVTILERQDTILNGMDREVVVAYTKKLQADGIQILNQVEVTKIN
DNQTTYTQKGNAKTITSDVILMAVGTKANLAGLEKLNLALNRNSVQTDNFCQTSIPGVYA
IGDVNGKHMLAHVASHEGIVAVTHALEQKAHPINYDRVPACIYGFPEIASIGMTEQQAKE
KQMDYKASKISLGAVGKSLADGEKEGFAKLIVCKKHLEILGMHIYAYNATELISEMAVGM
ELEGTAYELSQAIHPHPTLSELTFEALLGAVDKPIHA
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaattatgatgttttagtgattggtggaggtcctggtggatacgttgctgccatt
aaagctgctcaaatgggtgctaaagttgctttagtagaaaaacataaattaggtggtatt
tgtcttaattatggctgtattcctaccaaagcttatttaaaaagtgccaaaatgtataaa
gatatcaaacgttgtgctgattttggaattaaagtacaaaacggcgtttcttttgattgg
tcctccattttatcacgcaaaaataaaattgttgctcaacttactacaggtatatctttt
ctcctgaaaaaaaataaaattgatttttaccatggttttgcaagtgttctttctccttgc
gaagtccaagtagacactaacttattgcacacccaaaaattaattattgcaacaggcagt
accgcttttgttcctcctattccaggtgcccaagaagcttatcaaaaaggcattcttaaa
actagtaaagaattactacaactagaaagctatccttccaaagttactattgtaggaggc
ggtgttattggagtagaatttgcaactatttttaattcttttggtagcgaagtgactatt
ttagaaagacaagacactattctaaatggtatggatagggaagttgttgttgcatacact
aaaaaacttcaagcagacggcatccaaattttgaatcaagtagaagtaactaaaattaat
gacaatcaaactacctacactcaaaaaggcaatgccaaaacaattacttcggatgttatt
ttaatggctgtaggcaccaaagccaatcttgcaggcttagaaaaattaaatttagccctc
aaccgcaatagcgtccaaactgataatttttgtcaaacttcaattcctggagtatatgct
attggtgatgtaaacggcaaacacatgttagctcacgtggcaagtcatgaaggtattgta
gctgtgactcacgctttagaacaaaaagcacatcccattaattatgaccgtgttcctgct
tgtatttatggttttcctgaaattgcttctattggcatgaccgaacaacaagccaaagaa
aaacaaatggattataaagcttctaaaatatctctgggagctgttggcaaatctttagct
gatggcgaaaaagaaggttttgctaaattaattgtttgcaaaaaacatttagaaatttta
ggaatgcatatttatgcttacaatgctactgaattaattagtgaaatggctgtaggaatg
gaacttgaaggaactgcttacgaactatctcaagcaattcatcctcatcctaccttatca
gaacttacttttgaagctcttttaggagccgttgacaaaccaattcatgcataa
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