Rapeseed phyllody phytoplasma: RP166_6930
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Entry
RP166_6930 CDS
T10382
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rphy Rapeseed phyllody phytoplasma
Pathway
rphy03030
DNA replication
rphy03430
Mismatch repair
rphy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rphy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RP166_6930 (dnaX)
03430 Mismatch repair
RP166_6930 (dnaX)
03440 Homologous recombination
RP166_6930 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rphy03032
]
RP166_6930 (dnaX)
03400 DNA repair and recombination proteins [BR:
rphy03400
]
RP166_6930 (dnaX)
Enzymes [BR:
rphy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RP166_6930 (dnaX)
DNA replication proteins [BR:
rphy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RP166_6930 (dnaX)
DNA repair and recombination proteins [BR:
rphy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RP166_6930 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
AAA_22
DNA_pol3_gamma3
AAA_5
RuvB_N
AAA_19
AAA_16
AAA_24
AAA_30
AAA_2
nSTAND3
AAA_14
RCF1-5-like_lid
NPHP3_N
RNA_helicase
AAA_7
AAA_18
AAA_assoc_2
TsaE
Mg_chelatase
ABC_tran
NACHT
DUF6865
ATPase
Motif
Other DBs
NCBI-ProteinID:
QKX95647
UniProt:
A0A859IAJ5
LinkDB
All DBs
Position
complement(667227..669209)
Genome browser
AA seq
660 aa
AA seq
DB search
MSYLVLYRKYRPQTFADVVGQEIIIQTLKNAIRYQKINHCYLFSGNKGTGKTTLAKIFAK
AINCLLPNQGDVCFSCHYCQNFTKANTDITEIDGASYNGVDEIRELQDKAQYKAHTGKYK
VYIIDEVHVLTPNAFNALLKILEEPPEHVVFILITTEIYKIPDTIFSRAQSFAFENLNLK
NITAQLTKIAALENMFITEDAIKSIACHSEGGMRNALSLLDQVSAYQNNLITSEDVANIK
GTVSASIIKKMFQNLLKKEAIKALQLLHKVIDSGKNIDLLILDLIDAIKDYLIWNAKNKK
DSKTSPLSQDQKILLLEETNHIDHFLRILIKLQQDLKKSDQKKSLVEIAFLQICSLHSFQ
FQANLQETQQFVTNKTNIYNNEQASLALDETNAKENYEPTKLTQNNTEKKTFDKTEKIKL
TKLASIANEKPPKAPKTEYLHPVQDLQSQNNFSQKTPNNSTTSELTQQNNLPSQNSQETK
SPTKKNPYFSNSSLCDLISFAINILSNQDEPTKNKITNFWTNLKNRYSTHSYYKNVSEIL
DRGKIVALSQSQQMILVFEDEDAFELVLQKNIKQKALEILNNDTFAITDYIAFLKQDWQA
LETFYNKNHPHPNQASIAKFTATCNFDLDLYQIKATQPTKPAIIQLAYDFFGKDIVEIIN
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
gtgtcttatttagttttatacagaaaatacagaccacaaacttttgcagatgttgtcggt
caagaaattattatccaaactttaaaaaatgccatcagataccaaaaaattaatcattgt
tatctttttagcggcaacaaaggtactggaaaaactactttagccaaaatttttgccaaa
gccattaattgcttgttgcccaatcaaggagatgtgtgtttttcttgtcattattgccaa
aactttaccaaagcaaacacagacatcacagaaattgatggcgcttcttataatggggtt
gacgaaatcagagaattacaggataaagcccaatacaaagctcacacaggcaaatacaaa
gtctatattattgacgaagttcacgtccttacgccaaacgcttttaacgctttgttaaaa
attttagaagaaccgcccgaacatgtagttttcatcttgattactaccgaaatttataaa
atccctgacaccattttttcgcgcgcccaaagttttgcctttgaaaatttgaacctcaaa
aacatcactgcacaattaaccaaaattgctgctttggaaaatatgtttatcactgaagat
gccatcaaaagcattgcttgccattcggaaggtggaatgcgaaacgcccttagtttgtta
gatcaggtaagcgcttatcaaaataatttgattacttcagaagatgttgcaaatattaaa
ggtacggtgtctgccagcattatcaaaaaaatgttccaaaatctactaaaaaaagaagcg
atcaaagcattgcaacttttgcacaaagtaattgattcaggcaaaaacatcgacctttta
attttagatttaattgatgctatcaaagattatttaatttggaatgccaaaaataaaaaa
gattccaaaacatcgccactttcccaagaccaaaaaatattattgcttgaagaaacaaac
cacattgatcattttttaagaatcttaattaaattacaacaagacctcaaaaaaagcgat
caaaaaaaatctttggtagaaattgcctttttgcaaatatgctctctacattcttttcaa
tttcaagccaatttacaagaaacccaacaatttgtaacaaataaaacaaatatttacaat
aatgagcaagcatcacttgcattagatgaaacaaatgccaaagaaaattatgaaccaaca
aagcttacccaaaacaatacagaaaaaaaaacctttgacaaaacagaaaaaatcaaacta
actaaacttgcgtcaatagcaaacgaaaaaccaccaaaagcaccaaaaacagaatatctg
catccagtccaagatttacagtctcaaaataatttttcacaaaaaacacctaacaattct
actacctccgaattgactcaacaaaataacttgccttcccaaaactcacaagaaaccaaa
tccccaacaaaaaaaaacccttatttttccaattcttctctttgtgatttgatatcattt
gcaattaatattttatctaatcaagacgagccaaccaaaaacaaaataacaaatttttgg
acaaatttaaaaaatcgctattctactcacagttattataaaaatgtatccgaaattttg
gatagaggaaaaatagttgctttgagtcaatcccaacaaatgattttagtttttgaagat
gaagatgcctttgaacttgttttacaaaaaaacatcaaacaaaaagctttagaaattttg
aataacgacacttttgcaattacagactacattgcttttttaaaacaagattggcaagcc
ttagaaactttttacaacaaaaatcatcctcatccaaaccaggcatcaattgcaaaattc
acagctacttgcaattttgatcttgacttatatcaaatcaaagcgacccaaccaaccaag
cctgctattatccaactagcttatgatttttttggtaaagatatagtagaaataattaac
tag
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