Rapeseed phyllody phytoplasma: RP166_7240
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Entry
RP166_7240 CDS
T10382
Symbol
uvrD
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rphy Rapeseed phyllody phytoplasma
Pathway
rphy03420
Nucleotide excision repair
rphy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rphy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RP166_7240 (uvrD)
03430 Mismatch repair
RP166_7240 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rphy03400
]
RP166_7240 (uvrD)
Enzymes [BR:
rphy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RP166_7240 (uvrD)
DNA repair and recombination proteins [BR:
rphy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RP166_7240 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
RP166_7240 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
AAA_12
DEAD
DUF3391
T2SSE
NAT10_TcmA_helicase
ResIII
GpA_ATPase
Tudor_1_RapA
AAA_22
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
QKX95668
UniProt:
A0A859IAL5
LinkDB
All DBs
Position
694571..696814
Genome browser
AA seq
747 aa
AA seq
DB search
MFSNKTNFLEKLNKPQLAAVTSNAKSFYLAAGAGTGKTTTLNAKIAYLIEQKNLPSNQIL
ALTFTNKAAKQMQEKLAKMIGQEKTKGITICTFHSLGNQILRKFIPFLPFSYRTNFKILD
DNDCKKIIKDILKEMNIDPKRIKISELRKNISAIKRKHEPQNKDTLQHATQKEHNFQREN
RYEFEMPIKAKYQIFLQNNNLVDFDDLILYTHQLLQENADVRAFYQQKFQYLLVDEFQDT
DFFQYQILTLLAQNHQNIFVVGDPDQNIYSFRGARFENSQLFLNKFSPQLAFLEQNYRSS
KNILDKANLLIKHNEDHPFKKNLKSTKSGGEPVIYKFFSDYKEETDYITKTIQNLVLQGI
CSYKDFTILYRTNILGRPLEEKFLANSIPYQVFGGISFYQSKVVKDFLAYLNVIANPSQD
FDFKRIINTPKRGIGTTSLAHLEQLAQEKNLALFDALNYLDQTPIQPNTKTKLNEFKKLI
TALRQELINDSFDCLSDIITHIDEKIKYCHKNDETYKMQSIKDSETALHYIEELKSVFMQ
AEKNLEGNIFEKLTQLLDQISLYSEINEQTEQDPKTPSKNDRVKLSTIHKVKGLEFRVVF
IAAFEDIFFDCNQKEKSDLEESRRLAYVAITRAEEKLFLTGAYQRVSYGKQIDSQPSRFL
QEMGFFSKETQRPNYFSPHLFQPNQSNQVSCTNENGFFQKGDKVKHKTLGLGVVEAIMQD
LIQVRFINSQNIKIFENTTACLAKIKE
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgttttccaataaaaccaattttttagaaaaattaaataaaccccaacttgcagcagtc
acaagcaatgctaaatctttttatctagcagcaggagcaggcactggtaaaaccaccact
ttaaatgctaaaattgcttatttaatcgaacaaaaaaacttaccaagcaaccaaatttta
gcccttactttcaccaacaaagctgccaaacaaatgcaagaaaaacttgccaaaatgatc
ggtcaagaaaaaaccaaaggcattactatttgcacttttcactctttgggaaaccaaatt
ttgagaaaatttatcccctttttaccattttcatatcgcaccaattttaaaattttagat
gacaacgactgcaaaaaaatcatcaaagacattttaaaagaaatgaatatcgaccccaaa
agaataaaaattagcgaattaagaaaaaacatttctgctatcaaaagaaaacacgaacca
caaaacaaagacactttgcaacacgcaacccaaaaagaacacaattttcaacgtgaaaac
agatacgaattcgaaatgccaatcaaagctaaatatcaaatttttttgcaaaacaataat
ttagttgattttgatgaccttattttatatacgcaccaactgctccaagaaaatgccgat
gtaagggctttttatcaacaaaaattccaatatttattagttgatgaattccaagatact
gattttttccaataccaaattttgactcttttagcccaaaaccaccaaaatatttttgta
gtaggagaccctgaccaaaacatttattcttttcgaggagccagatttgaaaacagccaa
ttgttcttaaataaatttagtcctcaattagcttttttggaacaaaattaccgttcttct
aaaaacatcctagacaaagccaaccttttgattaaacacaacgaagaccatccttttaaa
aaaaatctcaaaagcactaaaagcggaggcgaacctgttatttacaagtttttttcagat
tataaagaagagacagactacatcacaaaaaccatccaaaaccttgttttacaaggtatt
tgcagctataaagattttactattttatatcgcactaacattttgggacgccctttggaa
gaaaaattcttagcaaacagcattccttatcaagtttttggaggtatttcattttaccaa
agcaaagtagtcaaagattttttagcttatctcaatgttattgcaaatccctcacaagat
tttgatttcaaacgcatcattaacacccctaaaagaggaattggaacaacttcacttgca
catctagaacaacttgcccaagaaaaaaacttagctctttttgacgcccttaactaccta
gaccaaactccaattcaaccaaataccaaaactaaactaaacgaatttaaaaaattaatt
acagctttacgccaagaactaattaatgattcttttgactgtcttagtgatataattact
catattgatgaaaaaattaagtattgtcacaaaaacgatgaaacttacaaaatgcaatca
ataaaagattctgagactgctttacattacatcgaagaattaaaatcagtttttatgcaa
gcagaaaaaaatttggaaggaaacatttttgaaaaactaacccaacttttagatcaaata
tctttgtatagcgaaattaacgaacaaaccgaacaagaccccaaaaccccaagcaaaaac
gatcgcgttaaactttctactattcacaaagtcaaaggtttagaatttagagtggttttt
atagctgcttttgaagatattttttttgattgcaaccaaaaagaaaaaagcgatttagaa
gaatcaagacgtctagcttatgtagcaattacaagagccgaagaaaagttatttttaact
ggggcttatcaaagagtttcatatggcaaacaaatagacagtcaaccttcacgcttttta
caagaaatgggctttttttcaaaagaaacccaaagaccaaattatttttccccacattta
tttcaaccaaaccaatcaaaccaagtatcttgcactaatgaaaatggcttttttcaaaaa
ggagacaaagtcaaacacaaaactctcggcttgggcgtagtggaagccatcatgcaagat
ttaatccaagtacgctttataaattcccaaaatataaaaatatttgaaaatacaactgct
tgtcttgctaaaataaaagagtaa
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