KEGG   Rapeseed phyllody phytoplasma: RP166_8170
Entry
RP166_8170        CDS       T10382                                 
Symbol
himA
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
rphy  Rapeseed phyllody phytoplasma
Brite
KEGG Orthology (KO) [BR:rphy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rphy03032]
    RP166_8170 (himA)
   03036 Chromosome and associated proteins [BR:rphy03036]
    RP166_8170 (himA)
   03400 DNA repair and recombination proteins [BR:rphy03400]
    RP166_8170 (himA)
DNA replication proteins [BR:rphy03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    RP166_8170 (himA)
Chromosome and associated proteins [BR:rphy03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    RP166_8170 (himA)
DNA repair and recombination proteins [BR:rphy03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      RP166_8170 (himA)
SSDB
Motif
Pfam: Bac_DNA_binding REC104 HU-CCDC81_bac_2 DUF3479
Other DBs
NCBI-ProteinID: QKX95739
UniProt: A0A859IAN6
LinkDB
Position
787790..788122
AA seq 110 aa
MNKKELIKSIAEVNKTSITQTEEFYNSFENALIKAITSNEEVVLSSKIGKFILKTRKAHT
TPETKFIINKQTGKKTGKRTGKNLKIPAKTVVSFKMSKPIKDEVKKLQLK
NT seq 333 nt   +upstreamnt  +downstreamnt
atgaataaaaaagaattaattaaatcaatagctgaggtaaataaaacctcaataacccaa
accgaagagttttacaactcatttgagaatgctctaattaaagcaatcacatcaaatgaa
gaagtggttttatcctctaaaattggtaaattcatcttaaaaactagaaaagcccacaca
actcccgaaactaaattcatcatcaataaacaaacaggaaaaaaaacaggaaaaagaact
ggcaaaaacttaaaaatacccgcaaaaacggttgttagttttaaaatgtcaaaaccaatc
aaagatgaagtcaaaaaactacaattaaaataa

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