Ralstonia pickettii 12J: Rpic_0109
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Entry
Rpic_0109 CDS
T00762
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rpi
Ralstonia pickettii 12J
Pathway
rpi00061
Fatty acid biosynthesis
rpi00071
Fatty acid degradation
rpi01100
Metabolic pathways
rpi01212
Fatty acid metabolism
rpi02024
Quorum sensing
rpi04146
Peroxisome
Module
rpi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rpi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Rpic_0109
00071 Fatty acid degradation
Rpic_0109
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Rpic_0109
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rpic_0109
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rpi01004
]
Rpic_0109
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpi04147
]
Rpic_0109
Enzymes [BR:
rpi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Rpic_0109
Lipid biosynthesis proteins [BR:
rpi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Rpic_0109
Exosome [BR:
rpi04147
]
Exosomal proteins
Exosomal proteins of breast milk
Rpic_0109
Exosomal proteins of breast cancer cells
Rpic_0109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ACD25272
UniProt:
B2UD93
LinkDB
All DBs
Position
1:128330..129916
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AA seq
528 aa
AA seq
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MSEATPDTALEANLLNRVTLGDTLHRSARKFGAKVALVDGARRMTHGELNADSNRYAHAL
LASSLKPGDKVAMVCGNSAQFLVAAYGILKAGLVWVPINAMLGPEDVRYILEHAEARHVV
IDAALYPALRDTLATLGLPAHQCFGEPVADGPQPVEQALQGHADTLPAVVIDDRDLALIM
YTSGTTGRPKGAMHSHRSVHAALMSNVAGLNLNETDVFSCLLPMFHCAQFATAASAMMVG
ATLVIQRGFDPAALLDVIANERITQLFGLPLMYAALLHHPLRAQRDLSSLRLCLYAMAPM
ARPLLERLIAEVCPNFALGSGQTEIFPMTMYFAPDQQLQRTGNYWGQPCMVNEAAVMDDQ
GNLLGPNQLGEIVHRGPNVMLGYYKDPQATANARRFGWHHTGDLGMWDADGQLQFKDRIK
DMIKTGGENVPSVKVEEVLLRHPAVANAAVVGLPHAHWVEAVAAFVCLKPDAHADAAALQ
AHCRAHLGSFEVPKHIAVVDKLPMTATGKIQKHVLRSANQTLFEGEAR
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagccacgccagacaccgcgcttgaagccaacctgctgaaccgggtgacgttg
ggcgatacgttgcatcgcagtgcgcgcaagttcggcgcgaaggtcgcgctggtcgatggc
gcccgccgcatgacgcatggcgaactcaacgcagacagcaatcgctacgcgcacgcgctg
cttgcaagcagcctcaagcccggcgacaaggtggcgatggtgtgtggaaactctgcgcag
ttcctggtggccgcgtacggcattctcaaggcgggactggtgtgggtgccgatcaacgcg
atgctcgggccggaagacgtgcgctacatcctcgaacatgccgaggcgcggcacgtggtg
atcgacgcggcgctgtacccggcgctgcgcgacacgctggcgacgctcgggctcccggcg
caccaatgcttcggtgaaccggttgccgacgggccgcaaccggtggagcaagcgctgcaa
ggccacgcggacacgctgcccgctgtggtgatcgacgatcgcgatctcgcgctcatcatg
tacaccagcggcacgaccggccgaccaaagggcgcgatgcattcgcaccgctcggtgcat
gccgcgctgatgtccaacgtcgccggcctgaatctgaatgagaccgacgtgttctcgtgc
ctgctgccgatgttccactgcgcgcagtttgcaacggccgcgtccgcgatgatggtgggc
gccacgcttgtcatccagcgcggctttgatccggcggcgctgctcgatgtgattgccaac
gaacgcatcacgcagctgttcggcttgccgctcatgtacgccgcgctgctgcatcatccg
ctgcgtgcgcagcgcgatctctcaagcctgcgcctgtgcctctatgcgatggcgccgatg
gccaggcccctgctcgaacgcctgattgccgaggtgtgccccaactttgccctcggctcc
gggcagaccgaaatttttccgatgacgatgtacttcgcgcctgaccagcaactgcagcgc
accggcaactattgggggcagccgtgcatggtgaacgaagcagcggtgatggacgatcaa
ggcaatctgctcggcccgaaccagttgggcgagatcgtgcaccgcggcccgaacgtcatg
ctcggctactacaaggacccgcaggccacggccaatgcgcgccgcttcggctggcaccac
acgggcgacctcggcatgtgggatgccgacggccagcttcagttcaaggaccgcatcaag
gacatgatcaagaccggcggcgagaacgtcccttcggtcaaggtggaagaagtgttgcta
cggcacccggccgtggcgaatgcggcagtggtcggcttgccgcacgcgcactgggtggaa
gcggtggccgcattcgtctgcctcaagcccgatgctcacgccgatgccgccgcgttgcag
gcgcattgtcgggcgcatctcggcagctttgaggtgcccaagcacatcgccgtggtcgac
aagctgcccatgacggcgaccggcaagatccagaaacacgtgctgcgcagcgccaaccag
acgctgttcgagggcgaggcccgctaa
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