Ralstonia pickettii 12J: Rpic_0413
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Entry
Rpic_0413 CDS
T00762
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rpi
Ralstonia pickettii 12J
Pathway
rpi00061
Fatty acid biosynthesis
rpi00071
Fatty acid degradation
rpi01100
Metabolic pathways
rpi01212
Fatty acid metabolism
rpi02024
Quorum sensing
rpi04146
Peroxisome
Module
rpi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rpi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Rpic_0413
00071 Fatty acid degradation
Rpic_0413
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Rpic_0413
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rpic_0413
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rpi01004
]
Rpic_0413
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpi04147
]
Rpic_0413
Enzymes [BR:
rpi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Rpic_0413
Lipid biosynthesis proteins [BR:
rpi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Rpic_0413
Exosome [BR:
rpi04147
]
Exosomal proteins
Exosomal proteins of breast milk
Rpic_0413
Exosomal proteins of breast cancer cells
Rpic_0413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF4235
Motif
Other DBs
NCBI-ProteinID:
ACD25571
UniProt:
B2UFP8
LinkDB
All DBs
Position
1:complement(439888..441627)
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AA seq
579 aa
AA seq
DB search
MNTVADRNSLTDRIWLKSYPEGVPAEINPDRYHSLVEVFRESVEKYRTRIAYVSVGTEMT
YDECERQAKQFAAWLQSRGVKKGDRVAIMLPNSLQYPVCLFGTLLAGAIVVNVNPLYTVP
ELAHQLRDSGAQTIVVLENFARTLEQALPGSQVRNIVITGIGDLMGGALNLKGRALNFVM
RHVQKQVPPYKLPSPVWLRDALAVGGSRTMQPVQLAPEDIAFLQYTGGTTGVAKGAMLTH
RNIIANLLQAEEWSKSMLNGGVETNVTLLPLYHIFSLTVNLLMFMTLGGRNILIANPRDT
KRVIFILRNERFSGIAGVNTLFNALLEDPDFATRDFSAMKITIGGGMAVQRAIAQRWKEV
TGHTIVEGYGLTECSPVVSMNPPHVTEFSGTIGLPAPSTEVRFKRDDGTIAPLGEPGELQ
VRGPQVMRGYWQRPEETAKSIDAEGWFSTGDIGVMDANGYIRLIDRKKDMILVSGFNVYP
NEIEDVVALHPDVLEVAAIGVPDPVAGERVKIIVVPRTGALTEPALLEHCRAHLTGYKMP
RIVEFRHEELPKSTVGKILRRELRDADPDIKRARAQAQQ
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccgttgccgaccgcaacagccttaccgaccgcatctggctgaagtcgtacccc
gagggcgtgcccgccgaaatcaaccccgatcgctatcactcactggtcgaggtgtttcgc
gaatcggtggaaaagtaccgcacccgcatcgcctacgtgagtgtcggcaccgaaatgacg
tacgacgagtgcgaacgacaagcgaagcaatttgcagcgtggctgcaatcgcgcggcgtg
aagaagggcgaccgcgtggcgatcatgctgcccaacagcctgcagtaccccgtgtgcctc
tttggcacgctgctggccggcgccatcgtcgtcaacgtcaacccgctgtacacggtgccg
gaactggcgcaccagttgcgcgactccggcgcgcagacgattgtcgtgctggagaacttc
gcgcgcacgctggagcaggctttgcccggcagccaggtgcgcaacatcgtcatcaccggc
atcggcgacctgatgggcggtgcgctcaacctcaagggccgcgcgctgaacttcgtgatg
cgccacgtgcagaagcaggtgccaccctacaagctgccctcgccggtctggctgcgagat
gcgctggccgtgggcggctcgcgcacgatgcaaccggtgcaactggcgccggaagacatc
gccttcctgcaatacaccggcggcaccacgggcgtggccaagggcgcgatgctcacgcac
cgcaacatcatcgccaacctgctgcaggcagaagagtggtccaagagcatgctcaacggc
ggcgtggaaaccaacgtcacgctgctgccgctgtatcacatcttctcgctcacggtgaac
ctgctgatgttcatgacgctgggcgggcgcaatatcctgatcgccaatccgcgtgacacc
aagcgcgtgatcttcatcctgcgcaacgaacgcttctcgggcattgcgggggtcaacacg
ctgttcaacgcactgctggaagatccggacttcgccacgcgcgacttctcggccatgaag
atcaccatcgggggcggcatggcggtgcagcgtgcgatcgcgcagcgctggaaagaagtc
acgggccacaccatcgttgaaggctacgggctgacggaatgctcgcccgtcgtctcgatg
aacccgccgcacgtgaccgaattcagcggcacgatcgggctgcccgcgccgtccaccgaa
gtgcgtttcaagcgcgacgacggcaccatcgcgccgctgggcgaacccggcgaactgcag
gtgcgtgggccgcaagtcatgcgcggttactggcagcgcccggaggaaaccgccaagtcc
atcgacgccgaaggctggttctccaccggcgacatcggggtgatggacgccaacggctac
atccgcctgatcgaccgcaagaaggacatgatcctggtctcgggcttcaatgtgtacccg
aacgagatcgaagacgtggtggcgctgcaccccgacgtgctggaggtggcggccattggc
gtgcccgatccggtggccggcgagcgcgtgaagatcatcgtggtgccgcgcactggcgcc
ctgaccgagcccgcgctgctcgaacactgccgcgcccatctgaccggctacaagatgccg
cgcatcgttgagttccgccacgaagagctgcccaagtcgaccgtgggcaagatcctgcgc
cgcgagctgcgcgatgccgatccggacatcaagcgcgcccgtgcacaggcgcagcaataa
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