Ralstonia pickettii 12J: Rpic_0771
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Entry
Rpic_0771 CDS
T00762
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rpi
Ralstonia pickettii 12J
Brite
KEGG Orthology (KO) [BR:
rpi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpi03032
]
Rpic_0771
03400 DNA repair and recombination proteins [BR:
rpi03400
]
Rpic_0771
Enzymes [BR:
rpi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Rpic_0771
DNA replication proteins [BR:
rpi03032
]
Prokaryotic type
DNA Topoisomerases
Rpic_0771
DNA repair and recombination proteins [BR:
rpi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Rpic_0771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ACD25922
UniProt:
B2U880
LinkDB
All DBs
Position
1:815029..817698
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AA seq
889 aa
AA seq
DB search
MDQFAKETLPVSLEEEMRSSYLAYAMSVIVGRALPDVRDGLKPVHRRALYSMHELNNDWN
RPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQNFSLRYMLVDGQGNFGSVDGDNAAAM
RYTEIRLSKIAHELLADLDKETVNFEPNYDGSETEPSVLPARIPNLLINGSSGIAVGMAT
NIPPHNLNEVVDGCLHLLRNPEATVDELIELIPAPDFPTAGIIYGISGVREGYRTGRGRV
VMRAKTHFEDIDRGQRQAIIVDELPYQVNKRTLLERIAELVTEKRIEGISDIRDESDKSG
MRVVIELKRGEVPEVVLNNLYKNTQLQDTFGMNMVALVDGQPRLLNLRQMLECFLLHRRE
VVTRRTVFDLRKARERGHILEGLAVALANIDEFIAIIKAAPTPPVAKAELMNRSWDSGLV
RDMLVRAESETSGGGAAYRPEGLLPVFGMQGDGLYRLSDTQAQEILQMRLQRLTGLEQDK
IVQEYREVMAQIADLLDILARPERITAIIVEELTAIRAEFGDERRSQIEHNATELDTEDL
ITPQDLVVTLSHSGYMKSQPISEYRAQKRGGRGKQAAATKEDDWIDTLFVANTHDYILCF
SNRGRLYWLKVWEVPQGSRNSRGRPIVNMFPLSPGEKINVILPVKQFDEQHFVFMATSKG
TVKKTALTEFSNPRKAGIIAVDLDEGDFLIGADITDGQHDVMLFSDAGKAVRFDENDVRP
MGRQARGVRGMNLEETQQVIAMLVAPAETEGEGAQSVAGSVLTATENGYGKRTPISEYTR
HGRGTKGMIAIQTSERNGKVVAAALVAPEDEIMLITTGGVLIRTRVDEIREMGRATQGVT
LISVGEGNKLSGLQRVMESDAEGAESIEGADAADAAPDADAQADDSSET
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggatcaattcgccaaagagacactcccggtatcgctcgaagaagaaatgcgcagctcg
tatctcgcttacgccatgagcgtaatcgtgggccgcgcgcttccagatgtgcgggatggt
ctcaagccggtgcatcgccgtgcgctttactcgatgcacgagctgaacaacgactggaat
cgcccctataagaagtctgcccgtattgtcggggatgtgatcggtaagtatcacccccac
ggcgacactgctgtatacgacaccatcgtgcggatggcgcagaacttctcgctgcgctac
atgctggtcgacggccaaggcaacttcggctccgtcgatggcgacaacgccgcggcgatg
cgttacaccgaaatccgcctgtcgaagattgcccacgaactgctggccgacctcgacaag
gaaaccgtcaattttgagccgaactacgacggttccgaaactgaaccgtccgttctgccg
gcccgcatccccaacttgctgatcaacggttcgtccgggatcgcggtgggtatggcgacg
aacattccgccgcataacctgaatgaagtcgtcgatggctgcctccacttgctgcgcaat
ccggaagcgacggtcgacgagctgatcgagctgatcccggcgccggacttcccaacggca
ggcatcatctacggcatttcgggtgtccgcgagggctatcgcaccggccgcggccgtgtg
gtgatgcgcgccaagacgcacttcgaggatatcgaccgcggccagcgccaggcgatcatc
gtcgacgagctgccgtatcaggttaacaagcgcacgctgctcgagcgcatcgccgagctg
gtcaccgaaaagcgcatcgaaggcatttccgacattcgcgatgagtcggacaagtccggc
atgcgcgtggtgatcgaactcaagcgcggcgaggtgccagaggtcgtgctcaacaacctc
tataagaatacgcagctgcaggacacgttcggtatgaacatggtcgcgcttgtcgacggc
cagccacgcctgctgaacctgcgccagatgcttgagtgcttcctgctgcaccgccgcgag
gtggtgacgcgtcgcacggtattcgacctgcgcaaggcacgcgagcgcggccacatcctt
gaaggtctggctgttgcactggccaacatcgacgaattcatcgccatcatcaaggctgcg
ccgaccccgccggttgccaaggctgagctgatgaaccgcagttgggattcgggcctcgtg
cgcgacatgctcgttcgcgccgagagcgaaacctccggcggtggcgccgcgtatcgtccg
gaaggtctgctgccggtgtttggtatgcagggcgacggcttgtacaggctgtcggatacg
caagcgcaggaaattctgcagatgcgcctgcaacgcctcaccgggctggagcaggacaag
atcgtccaggaataccgcgaagtgatggcgcagatcgccgatctgttggacatcctggct
aggccggagcgcattaccgccatcatcgtcgaggaactcaccgcgatccgcgctgagttt
ggcgatgagcgtcgctcgcagattgagcacaatgccaccgagttggatacagaagacctc
attacgccgcaggatctggtggtgacgctgtcccacagcggctacatgaagagtcagccg
atttccgaataccgggcgcaaaagcgtggcggccgcggcaagcaagctgcggcgacgaag
gaagacgattggatcgacacgctattcgtcgccaacacgcacgattacattctctgcttc
tcgaaccgcggccgtctgtattggctgaaggtgtgggaggtgcctcagggcagccgtaac
tcgcgcgggcgcccgatcgtcaatatgttcccgctgtcgccgggcgagaagatcaacgtg
atcctgccggtgaagcagttcgacgagcagcacttcgtgttcatggcgacctccaagggg
acggtcaagaagacggcgctgacggaattctcgaacccacgcaaggccggcatcatcgcg
gtcgatctggacgagggcgacttcctgatcggcgcggacattaccgacggccagcacgac
gtcatgttgttctccgacgcaggcaaggcggtgcgcttcgatgaaaacgacgtgcgcccg
atgggtcgccaggcacgcggcgttcgcggtatgaacctggaagagacgcagcaagtgatt
gccatgctggtggcgcccgcggaaaccgagggcgagggcgctcagtcggtcgccggtagc
gtgctgaccgccaccgagaacggctacggtaagcgcacaccgatctcggagtacacccgg
cacggccgcggcacgaagggcatgatcgccatccagacctccgagcgtaacggcaaggtc
gtggccgccgcgctggtggcgcctgaagacgaaatcatgctgatcacgacgggcggggtg
ctgatccgcacgcgcgtggatgagatccgtgaaatgggtcgcgccacgcagggcgtcacg
ctcatctcggtgggtgagggcaacaagctgtccgggctgcaacgggtgatggagtccgac
gctgaaggcgcggagagtatcgagggcgctgatgcggcggacgccgccccggatgccgat
gcacaggcggatgacagcagcgagacataa
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