Ralstonia pickettii 12J: Rpic_0930
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Entry
Rpic_0930 CDS
T00762
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
rpi
Ralstonia pickettii 12J
Pathway
rpi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Rpic_0930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpi03400
]
Rpic_0930
DNA repair and recombination proteins [BR:
rpi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Rpic_0930
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Rpic_0930
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
ACD26080
LinkDB
All DBs
Position
1:983788..984609
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AA seq
273 aa
AA seq
DB search
MAGRSDPIPDEAAEWLAEEGVAGAAPRRSFPAGRSETRVAAQPAFVLHSYPYRETSLIID
VFTPDYGRMALVAKGAKRPHSALRAVLQTFQPLSLSWSGRGDVRTLTRAEWVGGMLPLGG
EGLLSGFYLNELLVKFVAREDGHPVLFAHYVETLNKLAHGEPAAFTLRAFERVLLRETGF
AAQLDRCIDGEPVQADAEYVYHPERGIRRTLPSDPSSWPVLRGQTLIDMEHDDYASRPTT
AQQSRSLMRFLLHYHLHGTPLSTRQILIDLQKL
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggcgggacgatccgatccgattccggacgaggccgcggaatggctggccgaggagggc
gttgccggcgccgcgccgcgcaggagctttcctgccgggcgttccgaaacacgtgttgct
gcgcagccggccttcgtgctgcacagttatccgtatcgggaaaccagcctcatcatcgac
gtcttcacgccggactacgggcgcatggcgctggtcgccaagggggccaagcgtccgcat
tcggcgttgcgtgcggtgttgcagacgttccagccgctgtcgctgtcctggagcggtcgc
ggtgatgtgcgcacgctgactcgcgccgagtgggtgggcggcatgttgccgctgggcggc
gaggggctgctatccgggttctatctgaacgaactgctcgtcaagttcgtcgcccgcgaa
gacggccatccggtactgttcgcgcattacgtcgaaacactcaataagcttgcccatggc
gaacccgcggccttcacgctgcgggcgttcgaacgtgtgctgctgcgtgagaccggcttt
gccgcgcagctcgatcgctgcatcgacggcgaacccgtgcaggccgacgccgaatacgtc
tatcaccccgagcgcggcatccggcggacgcttcccagcgatccatcgtcctggcctgtg
ttgcgcggccagacgctgatcgacatggaacacgacgattacgcctcgcgccccacgacc
gcgcagcaaagccgcagcctgatgcgtttcctgctgcattatcatttgcatggcacgccg
ctttcgacgcgccagatcctgatcgacttgcagaaactatga
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