KEGG   Ralstonia pickettii 12J: Rpic_1064
Entry
Rpic_1064         CDS       T00762                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
rpi  Ralstonia pickettii 12J
Pathway
rpi02024  Quorum sensing
rpi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rpi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Rpic_1064
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Rpic_1064
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rpi03019]
    Rpic_1064
   03036 Chromosome and associated proteins [BR:rpi03036]
    Rpic_1064
Messenger RNA biogenesis [BR:rpi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     Rpic_1064
Chromosome and associated proteins [BR:rpi03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    Rpic_1064
SSDB
Motif
Pfam: Hfq LSM Hfq_1 SRP14
Other DBs
NCBI-ProteinID: ACD26212
UniProt: B2U9V4
LinkDB
Position
1:1131517..1131756
AA seq 79 aa
MSNKGQLLQDPFLNALRKEHVPVSIYLVNGIKLQGNIESFDQYVVLLRNTVTQMVYKHAI
STVVPARAVNFRVDEAPDA
NT seq 240 nt   +upstreamnt  +downstreamnt
atgagcaacaaagggcaattgctacaagacccgtttctgaatgcgctgcgtaaggagcat
gtgccggtgtcgatctacctcgtcaacggtatcaagctgcaaggcaacatcgagtcgttc
gaccagtacgtcgtgctcctgcgtaataccgtgacgcagatggtgtacaagcacgcaatc
tccaccgtggtgccggcccgtgccgtgaatttccgtgtggacgaagcgcctgacgcctga

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