Ralstonia pickettii 12J: Rpic_1275
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Entry
Rpic_1275 CDS
T00762
Name
(GenBank) RNA-binding S4 domain protein
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
rpi
Ralstonia pickettii 12J
Brite
KEGG Orthology (KO) [BR:
rpi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rpi03009
]
Rpic_1275
Enzymes [BR:
rpi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
Rpic_1275
Ribosome biogenesis [BR:
rpi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Rpic_1275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ACD26419
UniProt:
B2UB03
LinkDB
All DBs
Position
1:complement(1367760..1369784)
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AA seq
674 aa
AA seq
DB search
MRSPSERQPYRSRFMTTDSDDFPGDDDKHRASDPTQRATRPGKRATLGVRRDDEGNAVRS
TTGKPLRSSDLNRERQPLRPSQRRPKPEEGAGKPPRPARPPRRDDDGQTREAKPRRMQGD
RPPRRFDDERPPRRFNEEQRPPRRSDDERPPRRFEDRPPRRFDDERPPRRFDNDRPPRRF
DDERPPRRFSDDQRPPRRFDEERPRRYGDDQRAPRRDGDQRPPRRFDEERPPRRFNDEQR
PPRRFDEERPPRKFGDDQRPPRRFDDERPRRYGDDQRAPRRDGDQRPPRRLDDERPPRRF
SDDQRPPRRFDDERPRRYGDDQRAPRRDGDQRPPRRFDDERPPRRFDDEQRPPRRYGDDR
APRRFDDERPPRRFDNDRPPRRFDDRPARPQRPEREREERAPRHAEEQAPRPAQQTESSG
LVRLSKRMSELGLCSRREADEWIPRGWVLVDGEPVTELGSRVKPDAIIEIHQAARSEQGE
RVTVLMHKPVGYVSGQAEDGYQPAVSLFVPENQWEADPTRKRFAPWQRRALAPAGRLDID
STGLLVLTQDGRVARHLIGEDSTVEKEYLVRVVWHSPDGVVERDISKVFPEELMEKLRFG
LSLDGEALKPAKVSWQNEEQLRFVLREGKKRQIRRMCEQVGLEVVGLKRIRMGSIVLGDL
PVGQWRFLGPFEKF
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcgccatctgagcgccagccttaccggtctagattcatgactaccgattccgat
gattttccgggcgacgacgacaagcaccgcgccagcgacccgactcagcgcgccacccgc
ccgggcaagcgcgccacgctcggcgtgcgccgcgacgacgaaggcaatgccgtacgctcc
accaccggcaagccgctgcgctcatccgacctgaaccgcgagcgccagccgctgcgccca
tcgcagcgccggcccaaaccggaagaaggcgccggtaagccgccgcgccccgcgcgcccc
ccgcgccgcgacgacgacggccagacgcgcgaagccaagccgcgccgcatgcaaggcgat
cgcccgccgcgacgctttgatgatgagcgcccgccgcgtcgattcaacgaagagcaacga
ccgccccgccgctccgacgacgagcgtccgccgcgacgtttcgaagatcgcccacctcgc
cggttcgacgacgagcgtccgccgcgcaggttcgacaacgaccgtcccccgagacgcttt
gacgatgagcgcccgccgcgccggttcagcgacgaccaacggccgcctcgtcgtttcgat
gaggagcgcccacgccgctatggcgacgatcaacgcgcgccgcgtcgtgatggcgaccaa
cgccctccgcgacgctttgacgaagagcgcccgccacgccggttcaatgacgagcagcgg
ccaccgcgccgcttcgacgaagagcgccccccgcgcaagttcggtgacgatcagcgcccg
ccccgtcgtttcgatgacgagcgcccgcgccgctatggcgacgatcaacgcgcaccgcgt
cgtgatggcgaccaacgtccgccgcgccgccttgacgacgaacgccccccgcgccggttc
agcgacgaccaacgtccgccccgtcgtttcgatgacgaacgcccgcgccgctatggcgac
gatcaacgcgcgccgcgtcgcgatggcgaccagcggcctccacgacgctttgacgatgaa
cgcccgccgcgccgattcgacgacgagcaacggccgccgcggcgctatggcgatgaccgg
gctccgcgtcgcttcgatgacgaacgccctccgcgtcgttttgacaacgaccgaccaccg
cgtcgcttcgatgatcgtccggcacgtccgcaacggcccgagcgcgagcgtgaggaacgc
gctccgcgtcacgccgaggagcaggcaccgcgcccggcgcagcagaccgaatcgagcgga
ctggtccgtctgtccaagcgcatgtccgaactggggctgtgctcgcgccgggaggccgat
gaatggattccgcgcggctgggtgctggtggacggcgagcccgtcaccgaactgggttcg
cgcgtcaagccggatgcgatcatcgagatccatcaagctgcgagatccgagcaaggcgag
cgcgtcaccgtgctgatgcacaagccggtcggctatgtgtcaggccaggcggaagacggc
tatcagccggcggtttcgctgttcgtgccggaaaaccagtgggaagccgaccccacgcgc
aagcgcttcgcgccgtggcagcgcagggcgttggcgccggccggtcgactggatatcgac
tccaccggcttactggtgttgacgcaggacggccgtgtggcgcgccacctgatcggcgag
gattcgacggtcgagaaggaatacctggtgcgcgtggtatggcattcgccggacggcgtg
gtcgagcgcgacatctccaaggtcttcccggaagagctgatggagaagctgcgctttggc
ctgtcgctcgacggcgaagcactcaagcccgcgaaggtgagttggcagaacgaagagcag
ctgcgcttcgtgctgcgcgaaggcaagaagcgccagatccgccgcatgtgcgaacaggtg
ggactggaggtggtgggcctcaagcgcatccgcatgggcagcatcgtgctgggcgacctg
ccggtcggtcagtggcgcttcctggggccgttcgagaaattctga
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