Ralstonia pickettii 12J: Rpic_1320
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Entry
Rpic_1320 CDS
T00762
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
rpi
Ralstonia pickettii 12J
Brite
KEGG Orthology (KO) [BR:
rpi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpi03016
]
Rpic_1320
Enzymes [BR:
rpi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Rpic_1320
Transfer RNA biogenesis [BR:
rpi03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Rpic_1320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
LigT_PEase
Acb1
Motif
Other DBs
NCBI-ProteinID:
ACD26463
UniProt:
B2UBE2
LinkDB
All DBs
Position
1:1414277..1414945
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AA seq
222 aa
AA seq
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MQATRLSAGRHAGVDNGRIASPAFDDPAVTQLTLPGFEATPQLPAHRLFLAIKPDVDTAE
RIARLIQQLRPVVGFKGKALRTERLHVTLHHLGDFVHLPPDDVVGRVRAAAAGLALPAFD
ATFNQVVSFHGRRDHRPFVLLGDEGVGGLMAFQAALGEALQHAAVPVPRGHFKPHITLLY
DRGGFAPKAVEPITWTVREFVLIHSWLGKTRYDELGRWALKG
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcaacacgactttcagcgggacgtcatgcgggcgtcgataatgggcggatcgcc
agcccggcgtttgacgaccctgccgtgacccagctcactcttcccggattcgaagccacc
ccgcaattgcccgcgcatcgcctgtttctggcgatcaagcctgacgtggacaccgccgag
cgcatcgcgcggctgatccagcaattgcggcccgtcgtgggcttcaagggcaaggcgctg
cgtacggagcgcctgcatgtcacgctgcatcatctgggcgatttcgttcatctgccgcct
gacgacgtcgtggggcgtgtgcgtgcagcagcggccggcctcgcgttgccggcattcgat
gccacgttcaaccaggtggtgagcttccatggccggcgcgatcatcggccgtttgtgctg
ctgggcgatgagggcgtgggcggtttgatggcgtttcaggcggcgctgggcgaggcgctc
cagcatgccgccgtgccggtgccgcgtgggcatttcaagccgcacatcacgctgttgtat
gaccgcggtggctttgcgccgaaagcggtcgagcccatcacgtggaccgtgcgcgagttc
gttctcatccatagctggctaggcaaaacgcgctacgacgaactcggccgctgggcgctc
aaaggctga
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