Ralstonia pickettii 12J: Rpic_2412
Help
Entry
Rpic_2412 CDS
T00762
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rpi
Ralstonia pickettii 12J
Pathway
rpi00061
Fatty acid biosynthesis
rpi00071
Fatty acid degradation
rpi01100
Metabolic pathways
rpi01212
Fatty acid metabolism
rpi02024
Quorum sensing
rpi04146
Peroxisome
Module
rpi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rpi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Rpic_2412
00071 Fatty acid degradation
Rpic_2412
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Rpic_2412
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rpic_2412
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rpi01004
]
Rpic_2412
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpi04147
]
Rpic_2412
Enzymes [BR:
rpi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Rpic_2412
Lipid biosynthesis proteins [BR:
rpi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Rpic_2412
Exosome [BR:
rpi04147
]
Exosomal proteins
Exosomal proteins of breast milk
Rpic_2412
Exosomal proteins of breast cancer cells
Rpic_2412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
VWC2L_1st
Motif
Other DBs
NCBI-ProteinID:
ACD27546
UniProt:
B2U916
LinkDB
All DBs
Position
1:2509382..2511085
Genome browser
AA seq
567 aa
AA seq
DB search
MDESEYLGRVRALWARAWPVDTPREPHYPIGRVALTDYLRHWARTTPDKPAIHFYGHDTT
FAQLDDLSDRVAALLAQHGIGAGDRVAVFLSNCPQFNAVFFGILKLGAVYVPISPLSQRA
ELMHALGDATPRAIVTLDRLMPLVRDVRAETSIEHAFVTRYADVLPAEPTLPLPAMLTEP
PLACGDAIDLLPALAQTTPIPLPAGSLDAVAALNYTGGTTGLPKGCIHTQGDMVDMAAAF
STVSLRADADTVMLSFYPQFWIAGENTGLIFPAFLGVPLVLLARWDAEAFMAGVQRYRVT
NGSMLVDSAAEVMAHPRVHAYDLRSLRHTGVSSFVKKLNPEYRRAWRELTGSTMAESAWG
MTETQTCNSFTVGMQDDDFDLRSQPIFVGLPVPGTDFKICNFDTHDLVPIGAEGELCVRT
PTLLKGYWNKPEATAQTLRDGWFHTGDIGCIDEQGYVHYLGRRKEMLKVNGMSVFPAEIE
AMLGKHPAILGSAVVGRADEHRGQLPVAFVMLRPEAVGTLDSATLTGWCRENMAGYKVPI
VRIVDALPLTATGKVRKQDLAPLAEQL
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtccgagtatctcggccgcgttcgcgcgctctgggcgcgcgcatggccggtc
gataccccacgtgagccgcattacccgatcgggcgcgttgcccttaccgactatctgcgg
cattgggcgcgcaccacgccagacaagccagcgatccatttctacgggcacgacacgacg
ttcgcccagcttgacgatctctccgaccgcgtcgccgccctgctcgcgcaacacggcatt
ggcgcgggcgaccgcgtggccgtgttcctgtcgaactgtccgcagttcaatgcggtgttc
ttcggcatcctcaagctgggcgccgtgtatgtgccgatcagcccgctgtcgcagcgcgcg
gagttgatgcatgcgctgggcgacgcgacaccgcgcgccatcgtcacgctggaccgcctc
atgccgctcgtgcgtgacgtgcgcgccgaaacatcgatcgagcacgccttcgtcacacgt
tacgcagacgtgctccccgcagagccgacgctgccgctcccggcaatgctgaccgaaccg
ccgctggcctgcggcgatgcaatcgacttgttgcccgcattggcacagaccacgccgatc
cccctgccggcgggttcgctcgatgcggttgccgcgctcaactacaccggcggcacgacg
gggctgccgaagggctgcatccacacccagggcgacatggtcgatatggcggccgccttc
tcgaccgtgtcgctgcgcgcggatgcggacaccgtcatgctcagcttctatccgcagttc
tggattgcgggcgaaaacaccgggctgatcttccctgccttccttggcgtgccactggtg
ttgctcgcgcgttgggatgcggaggccttcatggctggcgtgcagcgctatcgcgtgacc
aacggctcgatgctggtcgatagcgccgccgaggtgatggcgcatccacgcgtgcatgcg
tacgacttacgctcgctgcgacatacgggcgtgtcgtcatttgtgaagaagctgaacccc
gaataccgccgcgcgtggcgcgaactgaccggctcgacgatggccgagagcgcctggggc
atgacggaaacacagacttgcaacagcttcactgtcggcatgcaggacgatgatttcgat
ctgcgctcgcagccgattttcgtgggcctgccggtgcccggcaccgatttcaagatctgc
aatttcgacacgcacgacctagtgccaatcggcgccgaaggcgaactctgcgtacgcacg
cccacgctgctcaaaggctactggaacaagcccgaagcaaccgcccaaacactgcgcgac
ggctggttccacaccggcgacatcggctgcatcgacgaacagggctacgtccactatctc
ggtcgccgcaaggagatgctcaaggtcaatggcatgagcgtgttcccggcggagatcgag
gccatgctgggcaagcacccggccatcctgggttctgccgtggtaggccgcgccgacgaa
caccgaggccagcttcccgtcgccttcgtgatgctgcgccccgaggccgtcggcacgctg
gacagcgccacgctcaccggctggtgccgcgagaacatggccggctacaaagtgcccatc
gtgcgcatcgtcgatgcactgccgctcacggccaccggcaaggtgcgcaaacaggatctc
gcgccgctcgctgaacagctctaa
DBGET
integrated database retrieval system
