Ralstonia pickettii 12J: Rpic_2420
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Entry
Rpic_2420 CDS
T00762
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
rpi
Ralstonia pickettii 12J
Pathway
rpi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rpi00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Rpic_2420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rpi03021
]
Rpic_2420
Transcription machinery [BR:
rpi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Rpic_2420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
ACD27554
UniProt:
B2U924
LinkDB
All DBs
Position
1:complement(2522339..2524828)
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AA seq
829 aa
AA seq
DB search
MGQAGSTGVKATVPAKTGKTQPRQTADIAVAAKTVKPTARTKGAIQSSTSGKVSTSMSTS
ARPGGTAASVALKGKTTTVAKSKVTEVESKQTPASASATKTGTARTNTAAKPAKAAAEDT
KRTAQAEATPTTPPAPRAEAAAEPKKRGRKPKAETQADDSSTDVTEEFDTPAAPAPKTEK
LKARDRKAKEKALLKEFAASQQGGSEEELEARRQKLKALIKLGKSRGYLTYAEINDHLPD
DMVDVESLETLVATLNDIGVAVYEQAPDAETLLLNDNAPSVTTEEEAEEEAEAALSTVDS
EFGRTTDPVRMYMREMGTVELLTREGEIVIAKRIEAGLKDMVMAISACPVTISEILAMGE
RVANDEAKIDEYIDGLIDPNAEADAAAAAEEEEEFEEEEAEEEGDEEEDEDDEGAGAAAA
SARQLEELKQAALLKFGVIGEQFDKMRRAFEKEGYKSKPYVKAQEAIQAELMTIRFTARN
VERLCDTLRGQVDEVRKLERAILNIVVDKCGMPRSDFVARFPGNETNLKWIETVVADGKP
YSTIVERNVPAVHELQQKLIDLQARVVLPLTELKDVNRKMSEGERRAREAKREMTEANLR
LVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIAD
QARTIRIPVHMIETINKMNRISRQILQETGNEPDPATLAEKMEMPEDKIRKIMKIAKEPI
SMETPIGDDDDSHLGDFIEDTNTLAPAEAALHGSMRGVVKDVLDSLTPREAKVLRMRFGI
EMSTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSDKLKSFLEGS
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggggcaggcaggatcgacaggggtgaaggccactgtgccggcaaagacggggaaaacc
cagccgcgccagaccgccgatatcgccgtcgccgccaagactgtcaaaccgacagcgcgc
acaaagggcgcgatccaatcttcaacctcaggcaaggtctcgacgtcgatgagcacgagc
gccagacctggcggcacagccgcttccgtcgcactcaagggcaagacaaccaccgtggcg
aaatcgaaagttaccgaagtcgagagcaagcagacccctgccagcgcaagcgcaaccaag
acgggtaccgctcgtaccaacaccgcagccaagccagccaaggcggccgcggaagacacc
aagcgcaccgcccaggcagaggccacccccacaactcctcccgcgccccgcgccgaggca
gcagccgagcccaagaagcgcggccgcaagcccaaggcagagacgcaggcagacgacagc
agcacggacgtgactgaagaatttgacacccccgccgctccggcaccgaaaaccgaaaag
ctgaaggcccgtgaccgcaaggccaaggaaaaagccctgctcaaggaattcgctgcctcg
cagcaaggcggttcggaagaagagcttgaggcccgccgccagaagctcaaggcgctgatc
aagctgggcaaatcgcgcggctacctgacctacgccgaaatcaacgaccacctccccgac
gacatggtcgatgtggagtcgctggaaacgttggttgccacgctcaacgacatcggcgtt
gccgtgtacgagcaggcgccggacgccgaaacgctgctcctgaacgacaacgcaccttcc
gtgaccacggaagaggaagctgaagaagaagctgaagccgcgctgtcgacggttgactcc
gaattcggccgcacgaccgacccggtgcgcatgtacatgcgcgaaatgggcacggtcgag
ctgctgacgcgcgaaggcgaaatcgtgatcgccaagcgcatcgaagccggcctgaaggac
atggtcatggccatctcggcctgcccggtcaccatctccgaaatcctcgccatgggcgag
cgcgttgccaacgacgaagccaagatcgacgagtacatcgatggcttgatcgatccgaac
gctgaagccgatgcagccgctgctgctgaggaagaagaggaattcgaggaagaggaagcc
gaagaagagggcgacgaagaggaagacgaggacgatgaaggtgccggcgctgccgcagct
tcggcccgtcaactcgaagagctcaagcaggctgcgctgctcaagtttggtgtgatcggc
gagcagttcgacaagatgcgccgtgcgttcgagaaggaaggctacaagtccaagccttac
gtgaaggcgcaggaagccatccaggccgaactgatgacgatccgcttcacggcacgcaac
gtcgagcgcctgtgcgacacgctgcgcggccaggtggacgaagtgcgcaagctcgaacgc
gccatcctgaacatcgtggtggacaagtgcggcatgccgcgcagcgacttcgttgcgcgc
ttcccgggcaacgagaccaacctgaagtggatcgagaccgtggtggccgacggcaagccg
tacagcaccatcgtcgagcgcaacgtgccggccgtgcacgaactgcagcaaaagctgatc
gacctgcaggcacgcgtggtgctgccgctgaccgagctgaaggacgtcaaccgcaagatg
tcggaaggcgagcgccgcgcccgtgaggccaagcgcgagatgaccgaggccaacctgcgt
ctggtgatctcgatcgccaagaagtacacgaaccgcggtctgcagttcctcgacctgatc
caggaaggcaacatcggcctgatgaaggcggtggacaagttcgaataccgtcgcggctac
aagttctcgacgtacgccacgtggtggatccgtcaggccattacgcgttcgatcgccgat
caggcgcgcaccatccgtattccggtgcacatgatcgagacgatcaacaagatgaaccgc
atctcgcgtcagatcctgcaggaaaccggcaacgagccggatccggcaacgctggccgag
aagatggagatgccggaagacaagatccgcaagatcatgaagatcgcgaaggagccgatc
tccatggaaacgccgatcggtgacgacgacgactcccatctgggcgatttcatcgaggac
acgaacacgctggccccggccgaagcggcgctgcatggctccatgcgcggcgtggtgaag
gacgtgctcgattcgctgacgccgcgcgaagccaaggtgctgcgcatgcgttttggtatc
gagatgagcaccgaccacacgctggaagaagtcggcaagcagttcgacgtgacccgcgag
cgtatccgtcagatcgaagcgaaggcactgcgcaagctgcgccatccgagccgctctgac
aagctgaagagcttcctcgagggaagctga
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