Ralstonia pickettii 12J: Rpic_2440
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Entry
Rpic_2440 CDS
T00762
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rpi
Ralstonia pickettii 12J
Pathway
rpi03420
Nucleotide excision repair
rpi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rpi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Rpic_2440
03430 Mismatch repair
Rpic_2440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpi03400
]
Rpic_2440
Enzymes [BR:
rpi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Rpic_2440
DNA repair and recombination proteins [BR:
rpi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Rpic_2440
MMR (mismatch excision repair)
Other MMR factors
Rpic_2440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ACD27574
UniProt:
B2U944
LinkDB
All DBs
Position
1:complement(2547460..2549820)
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AA seq
786 aa
AA seq
DB search
MSDLLANLNPEQRAAITLPDESALILAGAGSGKTRVLTTRIAWLIQSARVSPSGVLAVTF
TNKAAKEMTARLQAMLPINTRAMWIGTFHGLCNRLLRAHYRDAGLPQTFQILDTQDQLSA
VKRLLKSLNIDDEKFPPKNVQYFINGAKEQGLRAGDLEIANEYDRRMADLYAAYDAQCQR
EGVVDFAELLLRCYELLRYNDAIRAHYQRRFKHILVDEFQDTNKLQYAWLKILAGLGEPG
VTPNAIFAVGDDDQSIYAFRGANVGNMVDFEREFRVEHRIKLEQNYRSHGHILDTANHLI
SHNTRRLGKNLRTDAGHGEPVRVYQAATDGQEAGWIVDEIRDRIATGMSRSEIAILYRSN
AQSRVIEHALFSAGIPYKVYGGLRFFERAEIKHALAYLQLLENPDNDAAFGRVVNFPARG
VGARSLEQLQDAARLYGISLAAAVPYLTGAAGTKLSAFVRLIEQMRADTRQMTLPEIVQH
VIHASGLITHYQGEKEGQDRIENLQELVTAAQAFVAEEGYGVDAIATALPVRHDAMLRIE
GGEIDTASELVTDETPAEMTPLVAFLTHASLEAGDNQAQAGQDAVQMMTVHAAKGLEFHV
VFITGLEEGLFPHENSQMEKDGLEEERRLMYVAITRARERLYLSFAQSRVLHGQVRYHIR
SRFFDELPEDTLKWLTPQHSGYQATRRVQGDTAWGKDWFKRPERGDDDAYTGRPTGGMDT
GKNYADAKRAEATGFRVGQSVFHNKFGEGVITTLEGEGAEARAQIKFNRHGVKTLALGIA
KLDPIN
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacctgctcgccaatctgaaccccgaacaacgcgctgccatcacgcttcccgat
gaatcggcgctgatcctggcgggcgcaggcagcggcaaaacgcgcgtgttgaccacccgc
atcgcgtggctgatccaaagcgcgcgggtgtcgccgtcgggtgtgctggccgtcacgttt
acgaacaaggcagccaaggaaatgacggcccgcctgcaggccatgctgccgatcaacacg
cgcgccatgtggatcggcacgttccacggtctgtgcaaccggttgctgcgcgcgcattac
cgcgatgccggcctgccgcagacgttccagattctggatacgcaagaccagctctccgcc
gtcaagcgcctgctcaagtcgctcaatatcgacgacgagaaattcccgcccaagaacgtc
cagtacttcatcaacggggccaaggagcagggcctgcgcgcgggcgatctggaaatcgcc
aacgagtacgaccggcgcatggccgatctctacgccgcttacgacgcgcaatgccagcgc
gaaggcgtggtcgattttgccgagctgctgctgcgctgctacgaactgctgcgctacaac
gacgccatccgtgcgcactaccaacggcgtttcaagcacatcctggtggacgagttccag
gatacgaacaagctgcaatatgcgtggctgaagattctggccggcctgggcgagcccggc
gtcacgcccaacgccatctttgccgtgggcgacgatgaccagagcatctacgcgtttcgt
ggtgccaatgtcggcaacatggtcgactttgaacgcgaattccgcgtcgagcaccggatc
aagctggagcagaactaccgctcgcatggccatatcctcgataccgccaaccacctgatc
tcgcacaacacgcgtcggctgggcaagaacctgcgcacggacgccggccacggtgagccg
gtgcgcgtctatcaggccgcgacggacgggcaggaggcgggctggattgtcgatgagatc
cgcgaccgtattgcgaccggcatgtcgcgctcggaaatcgccatcctgtatcgcagcaac
gcgcagtcgcgggtgatcgaacacgcgctgttctcggcaggcatcccgtacaaggtgtac
ggcggcctgcgctttttcgagcgtgcggaaatcaagcacgcgctggcgtatcttcagctt
cttgagaatcccgacaatgacgcggcgtttggtcgcgtggtgaatttcccggcgcgtggc
gtcggggctcgttcgctcgagcagttgcaggatgcggcgcggctgtatggcatttcgctc
gcagcggcggtgccgtacctcacgggggcagcaggcaccaagctgtcggcgtttgtgcgt
ctgatcgaacagatgcgtgccgacacgcgccagatgacgctgcccgaaatcgttcagcac
gtcattcacgccagcgggctgatcacgcattaccagggtgaaaaggaaggccaggaccgc
atcgagaacttgcaggaactggtgacagccgcccaagctttcgttgctgaagaaggctac
ggcgtggatgcgattgcgaccgcgctgcccgtgcgccacgatgccatgctgcgcatcgaa
ggcggcgagatcgataccgcttctgaactcgtcaccgacgaaacgcctgcagagatgacg
ccgctcgtcgcgtttctgacgcatgcctcgctggaggctggcgacaaccaggcccaggcc
ggccaggatgccgtgcaaatgatgaccgtgcatgcggccaaggggctggaattccacgtc
gtcttcatcaccgggctggaagagggcttgttcccgcacgaaaacagccagatggagaag
gacggcctggaggaagagcgccgcctgatgtacgtggcgatcacgcgtgcgcgtgagcgg
ttgtatctatcgttcgcgcaaagccgcgtgctgcacgggcaggtccgctaccacattcgc
tcacgcttctttgacgaactgcccgaagacacattgaagtggctgacgccgcagcactcg
ggctaccaggcgacgcgtcgtgtgcaaggcgataccgcatggggcaaggattggttcaag
cgcccagagcgtggcgatgacgacgcctacaccggccgcccgaccggcggcatggacacc
ggcaagaactacgccgacgccaagcgcgcagaggccaccggcttccgcgtcggccagtcg
gtgttccataacaagttcggggaaggcgtcatcacgacgctggaaggcgagggcgccgag
gcgcgcgcccagatcaagttcaaccgccacggggtgaagacgctggcgctgggcatcgcc
aagctggacccgatcaactga
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